Gene Swit_2077 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSwit_2077 
Symbol 
ID5198336 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSphingomonas wittichii RW1 
KingdomBacteria 
Replicon accessionNC_009511 
Strand
Start bp2335114 
End bp2336133 
Gene Length1020 bp 
Protein Length339 aa 
Translation table11 
GC content72% 
IMG OID640581622 
Productamidohydrolase 2 
Protein accessionYP_001262574 
Protein GI148554992 
COG category[R] General function prediction only 
COG ID[COG3618] Predicted metal-dependent hydrolase of the TIM-barrel fold 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones35 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones19 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACGGAGG GTCCGGCCGG TGACGACGTC GCGATCGAGC CGGACCTGCC GATCGTCGAT 
CCGCACCATC ATCTGTGGGA CGGCATCCCC GCGCTGGGGC CCCGCGGCGG CCGTCGCTAT
CACACGCCCG AGCTTCTGGC CGACCTGGGC TCGGGCCATC GGATCGTCCA GACCGTCGCG
ATCGAATGCG GCGCGCATTA TTTCGACGAC GGTCCCGAAA GCCTGCGCCC GGTCGGCGAG
ACCTTGTTCT TCCTCGGCTC GGCCAAGGGC ACGGCGGGCC TGTGCGCGGG CATCGTCGGC
CATGCCGACC TGCGGCTGGG CGACGCGGTG GCGCCGGTAC TGGAGGCGCA TGTCGATGCC
GGCAAGGGCC GTTTCCGCGG CATCCGCCAG TCGGCCAATT GGGACGGCGA TCCGCTGTTC
GACAATTGGC CGCGCCGGCC GCCGCCGGGG CTGCTCGCCG ACCCCGGCTT CCGCGCCGGC
TTCGCCCGGC TCGCGCCGCT CGGCCTGTCG TTCGACGCCT GGATCTTCCA TCCGCAGATC
GGCGAGCTCG CCGACCTCGC CGCCGCCTTC CCCGACACGG CGATCATCCT CGACCATGTC
GGCGGGCTGC TCGGCATCGG CAACCACGGC GCCCGCCCGG CCGAGACCTT CGCGCTGTGG
CGCGACGGCC TGGCGCGGCT GGCGGAGCGG CCCAACGCGC TGGTCAAGAT CGGCGGACTC
GGCATGCCGT TCGCCGGATC GCCGCTCCAC ATGCGCGAGC CGCCGGCGAC GGTGGACGAG
CTGGTCGCCG CCTGGCGCCC GGTGGTCGAG ACCTGCGTCG AGCTGTTCGG CGCCGACCGC
TGCATGTTCG AGAGCAATTT CCCAGTCGAT TCGGCGACCT GCGGCTATGT CCGCCTGTGG
AACGCCTTCA AGCGGATCAG CGCCGGCTGG TCGGCCGACG AGCGCGCCGC CCTGTTCGCG
GGAACCGCGC GCCGGGCCTA TCGGCTGCCG GACACCGACG AGGCGATCGT TCGACGCTGA
 
Protein sequence
MTEGPAGDDV AIEPDLPIVD PHHHLWDGIP ALGPRGGRRY HTPELLADLG SGHRIVQTVA 
IECGAHYFDD GPESLRPVGE TLFFLGSAKG TAGLCAGIVG HADLRLGDAV APVLEAHVDA
GKGRFRGIRQ SANWDGDPLF DNWPRRPPPG LLADPGFRAG FARLAPLGLS FDAWIFHPQI
GELADLAAAF PDTAIILDHV GGLLGIGNHG ARPAETFALW RDGLARLAER PNALVKIGGL
GMPFAGSPLH MREPPATVDE LVAAWRPVVE TCVELFGADR CMFESNFPVD SATCGYVRLW
NAFKRISAGW SADERAALFA GTARRAYRLP DTDEAIVRR