Gene Swit_2071 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSwit_2071 
Symbol 
ID5196736 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSphingomonas wittichii RW1 
KingdomBacteria 
Replicon accessionNC_009511 
Strand
Start bp2327180 
End bp2327974 
Gene Length795 bp 
Protein Length264 aa 
Translation table11 
GC content69% 
IMG OID640581616 
ProductAcyl CoA:acetate/3-ketoacid CoA transferase beta subunit-like protein 
Protein accessionYP_001262568 
Protein GI148554986 
COG category[I] Lipid transport and metabolism 
COG ID[COG2057] Acyl CoA:acetate/3-ketoacid CoA transferase, beta subunit 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones39 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones18 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCGCGGC ATACGCTCAC CGAGCTGATC ATCGCCCGCG CCGCCAAGGC CTGGGCCGAC 
GATCCCGAAT GGCTGGCCAC CGGCATCACC CCGGTGCCGC GCCTCGCGGC CGGTCTCGCC
AAGACGCTCT ACAACCCGCG CCTGATGATC ACCGACGGCG AGAACTGGTT CGCGCGCGAT
CCGGTGCCGC TCGGCCCGCG CGGCGGCTTC GAGCCGGTGA TCGAAGGCTG GGCGCCCTAT
CTGCGCACCT TCGACAATCT GTGGAACGGC CGCCGCCACG CGATGGTCGC CCCGGTGCAG
ATCGACCGCT ACGGCCAGAC CAACATCAGC GTGATCGGCG ACCATGCCCA GCCGAAGGCG
GCGCTGCTCG GCGCGCGCGG CTTTCCCGGC AATTCGATCC ACCATCCGAA CAGCTTCTTC
TTCCCCGCGC ACAACAAGCG CGCCTTCGTC GAGGGGGAGG TCGATTATGT CTGCATGGCG
GGCTACAACC CGGCGCGCTG GCCCGGCGGG CGCAAGCCGT TCAGGCTCGA GCTGCGGCTG
ATCCTCACCA ATTTGTGCGT GATGGACTTC GGCGGGCCCG ATCATGCGAT CCGGCTGGTC
TCGCTCCACC CCGGCGTGAG CTTCGAGGAG GTGCAGGACA ATACGGGCTT CCCGATCCAC
CGCGACGGCG GCGAGACGCC CGAGACGCCG GCCCCGACCG ACGAGGAACT GGCGGTGATC
GCCCGGCTCG ATCCGCACGA TGTTCGCGCG ACGATCATCA AGGGGAACCC GCCGGGCCGG
CCCGAATGGG GGTGA
 
Protein sequence
MARHTLTELI IARAAKAWAD DPEWLATGIT PVPRLAAGLA KTLYNPRLMI TDGENWFARD 
PVPLGPRGGF EPVIEGWAPY LRTFDNLWNG RRHAMVAPVQ IDRYGQTNIS VIGDHAQPKA
ALLGARGFPG NSIHHPNSFF FPAHNKRAFV EGEVDYVCMA GYNPARWPGG RKPFRLELRL
ILTNLCVMDF GGPDHAIRLV SLHPGVSFEE VQDNTGFPIH RDGGETPETP APTDEELAVI
ARLDPHDVRA TIIKGNPPGR PEWG