| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Swit_2060 |
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| Symbol | |
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| ID | 5200972 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Sphingomonas wittichii RW1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009511 |
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| Strand | + |
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| Start bp | 2311822 |
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| End bp | 2314167 |
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| Gene Length | 2346 bp |
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| Protein Length | 781 aa |
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| Translation table | 11 |
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| GC content | 66% |
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| IMG OID | 640581605 |
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| Product | TonB-dependent receptor |
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| Protein accession | YP_001262557 |
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| Protein GI | 148554975 |
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| COG category | [P] Inorganic ion transport and metabolism |
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| COG ID | [COG1629] Outer membrane receptor proteins, mostly Fe transport |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 20 |
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| Plasmid unclonability p-value | 0.437498 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 16 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAAGAGAC ATGCCTTGCG CCGCCGGGCG CGATCGTCGG TCGCCGTCGC GGCGCTGATG
CTGCCGGCTG CCGCCTTCGC CCAGTCGGAC CAGCCGGCCG GGGAAGGCCA ATATGGCGGC
GACATCGTCG TCACCGCGAC CCGCCAGTCC GAATCGCTGA GCAAGGTGCC GCTGAGCGTC
AGCGCCTTCT CGCAGGAGAA GCTCGACAGC CGCGGCGTCC GCAGCTTCGC CGACGTGATC
CGCCAGACGC CGGGCGTCGT GTTCGAGGCG ACCAGCATCA CCACCAACAT CTCGATCCGC
GGCATCAAGT CGACCGCCGG CGCCGCCACC ACCGGCGTCT ATATCGACGA CACGCCGATC
CAGTTCCGGT CACTGGGGTT CAGCGGCGGC AACACCTATC CGGTGATCTT CGACCTCGAG
CGCGTCGAGG TTCTGCGCGG TCCGCAAGGC ACGCTGTTCG GCGCGGGATC GGAGGGCGGC
ACGATCCGCT TCATCTCGCC GCAGCCGAGC ACGACCAGGT CGTCGGGCTA TGCGCGCACC
GAGTTCGCGA TGACCGAGGA TGGCGGGCCA AGCTACGAAG CCGGCCTCGC GCTCGGCGTT
CCGCTGATCC AGGACAAGCT CGGCGTTCGC GTCAGCGGCT ATTACCGCCG CGACGGCGGC
TGGATCGACC GCGTCCGCTT CGAAGACAAG GGCGTCGTCG CCGACGACAG CAATTATCAG
GACAGCTATG TCGGCAAGAT CGCCTTCGCC TGGGAACCGG TTCCCGATCT GAGGATCACC
CCGTCCTTCA CCTATCAGAA GGTCTATACC AACGACAGTC CGGCGACCTG GGACAATGTC
CGCGCCGACT TCACCGTGCC GGACGCGCCC TTCTCCGATT ATGACGATGG CCGCTTCCTC
AACGGCAACC GCGTCCAGGA ATGGACCCGC GACCGCTTCT ACTTGCCGAC GCTCAACGTC
CAATACGGGC TGGGCCCGGT CGACCTGACC GCGATCGCCT CCTATTTCGA TCGCAGGCAG
ACGCTCGCCT CCGACTATAC GATCTTCGCC CAGAGCATCT TCACCGGCAT CTCGCTGCCG
CTGTTCCCCG ACCAGCGCGC CGTCACCGCG CTGAAGAACA CGCAGAAGAT CACCACCGGC
GAGCTACGCC TCGCCTCGTC GGACCGCGAC GCGATGCTCA CCTGGCAGGT CGGCGGCTTC
TACCAGAAGG CCAAGCAGAC TTCGTTCCAG CAGGTCGACG ATCCCTCCTT CTTCAAATAT
GCGCCGTTCC TGGCCCCGGT CCTGCCGCCG CTGATCGACG GGCGTCTCGT CTACGACCAG
TTCGCCAAGT CGAAGGACGA GCAGATCGCG GCCTTCGGCC AGGTCAACTT CAAGCCGGTC
GACCGGCTGA CGCTGACGGT GGGCCTGCGC TACGGCCAGA CCAGGTTCAC CATCAACTCC
TTCGCGCAGG GGCCCGTCGT CGGCCCGTCG GTGACCGACC TCGGCCGCCA GAAGGAGAAG
CCGTTCACGC CGAAGTTCGG CGCCGAGTTC CAGGTGACGC CGGGCACGCT GGTCTACGCC
TCGGCCTCGA AGGGCTTCCG TCCGGGCGGC TACAACCCGC AGGTCGGCGT CCCCTGCCAG
GCCAGCGACC TCGATCCGCT CGGCTATCCG AACGGGCGGC CGCAGACCTA TGACTCGGAT
TCGGTGTGGA GCTACGAGCT CGGCCTCAAG ACCCGCACCG GCCGCTTCAG CGCGCAGGGC
AGCGTCTACC AGATCGACTG GAAGAACATC CAGCAGGTCG TCAGCCTCGG CGGTTGCGGC
TTCCAGTTCA CCGGAAACCT CGGCACCGCC CGGAGCCGCG GCTTCGATTT CCAGCTCGAC
TACCGCCTGA CCGACGATTT CACCTTTCAG GCCGAGATCG GCTACACCGA CGCCAAATTC
CTCAAGACCT TCTTCGGGGG TCCGCTGGCG GCCCGGCCGC TGGTGACCAA GGGCGACCAT
GTCGTCGCGC CGCCGTGGAC GGTGTCGGTC CACGGCCAGT ACGAACTGTC GCTGCGGGAG
CACCACGACT CCTATGTCCG CGCCGACTTC GACTATCGCT CGCACCAGTC GGACCCGACG
CCGGGGATCG ATCCGCGCAA CGGCGGCTCG GACCCGACCC TCGACAACGC GCCGGCGCTC
AAGGCGCTGT CGATGCGGAT CGGCCACCGG ATCGACGGCA TCGACATGTC GCTGTTCGTC
AACAACCTGC TCGACCAGGC CGTCTGGCAG GGCCGTCGCG CCCGCGACAA CAACAATGCG
ACGATCTACA AGTCGCACAT CGTCCGCCCG CGCACCTTCG GCGCGACGAT CGGCTATCGC
TTCTGA
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| Protein sequence | MKRHALRRRA RSSVAVAALM LPAAAFAQSD QPAGEGQYGG DIVVTATRQS ESLSKVPLSV
SAFSQEKLDS RGVRSFADVI RQTPGVVFEA TSITTNISIR GIKSTAGAAT TGVYIDDTPI
QFRSLGFSGG NTYPVIFDLE RVEVLRGPQG TLFGAGSEGG TIRFISPQPS TTRSSGYART
EFAMTEDGGP SYEAGLALGV PLIQDKLGVR VSGYYRRDGG WIDRVRFEDK GVVADDSNYQ
DSYVGKIAFA WEPVPDLRIT PSFTYQKVYT NDSPATWDNV RADFTVPDAP FSDYDDGRFL
NGNRVQEWTR DRFYLPTLNV QYGLGPVDLT AIASYFDRRQ TLASDYTIFA QSIFTGISLP
LFPDQRAVTA LKNTQKITTG ELRLASSDRD AMLTWQVGGF YQKAKQTSFQ QVDDPSFFKY
APFLAPVLPP LIDGRLVYDQ FAKSKDEQIA AFGQVNFKPV DRLTLTVGLR YGQTRFTINS
FAQGPVVGPS VTDLGRQKEK PFTPKFGAEF QVTPGTLVYA SASKGFRPGG YNPQVGVPCQ
ASDLDPLGYP NGRPQTYDSD SVWSYELGLK TRTGRFSAQG SVYQIDWKNI QQVVSLGGCG
FQFTGNLGTA RSRGFDFQLD YRLTDDFTFQ AEIGYTDAKF LKTFFGGPLA ARPLVTKGDH
VVAPPWTVSV HGQYELSLRE HHDSYVRADF DYRSHQSDPT PGIDPRNGGS DPTLDNAPAL
KALSMRIGHR IDGIDMSLFV NNLLDQAVWQ GRRARDNNNA TIYKSHIVRP RTFGATIGYR
F
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