Gene Swit_2054 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSwit_2054 
Symbol 
ID5199759 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSphingomonas wittichii RW1 
KingdomBacteria 
Replicon accessionNC_009511 
Strand
Start bp2305496 
End bp2306014 
Gene Length519 bp 
Protein Length172 aa 
Translation table11 
GC content60% 
IMG OID640581598 
Producthypothetical protein 
Protein accessionYP_001262551 
Protein GI148554969 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones24 
Plasmid unclonability p-value0.0592172 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones18 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACCTATA GCCGCGAAGA AGTCGAGGCC GCGATCATTC GGCTCCGCGA GGCATTCGTG 
GAAGCGGAGC GGCGCAACAG CTGGTCATGG ATCGCCGACG AACTCTATCA TGAGGACGCG
ACCTATTACT GCCCTTATGG TGGAGTGATG CCGGTCTTCG CCCGAAGCCG CGAGGAAATC
CGCGCGACCC ATTATGGCCG CGACATGGAC GTGGGCTCCG GCTGGGAAGG CTGGAGCTTT
CCCATCACCG ATTTCGCGGT GAACGGCGAT CGCATCTTCA GCCGCTGGGT CAATCGCGGA
CCAGGCCGGC GACCGGACGG GAGCTATTAC GAGACCGACG GCGTTTCGTT CATTACCTAT
GGTGGAAACG GAAAATTCTC GTCGCAATAT GACCTGTTCG ACATTGGCCA CCAGATGATG
CTGTGCGATG AACTCAAGCA GGCTGGCCTG CTGAACGAAA CGCTCGAACG CGAGTGGGTG
CTGCCGATGA AGCAGCGCAT CCGTGCCGCC CTCGGCTGA
 
Protein sequence
MTYSREEVEA AIIRLREAFV EAERRNSWSW IADELYHEDA TYYCPYGGVM PVFARSREEI 
RATHYGRDMD VGSGWEGWSF PITDFAVNGD RIFSRWVNRG PGRRPDGSYY ETDGVSFITY
GGNGKFSSQY DLFDIGHQMM LCDELKQAGL LNETLEREWV LPMKQRIRAA LG