| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Swit_2053 |
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| Symbol | |
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| ID | 5199758 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Sphingomonas wittichii RW1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009511 |
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| Strand | + |
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| Start bp | 2304310 |
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| End bp | 2305506 |
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| Gene Length | 1197 bp |
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| Protein Length | 398 aa |
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| Translation table | 11 |
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| GC content | 65% |
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| IMG OID | 640581597 |
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| Product | Rieske (2Fe-2S) domain-containing protein |
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| Protein accession | YP_001262550 |
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| Protein GI | 148554968 |
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| COG category | [P] Inorganic ion transport and metabolism
[R] General function prediction only |
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| COG ID | [COG4638] Phenylpropionate dioxygenase and related ring-hydroxylating dioxygenases, large terminal subunit |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 24 |
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| Plasmid unclonability p-value | 0.216867 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 18 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | GTGAAACCGT CATGCTTTTT GCCCATGGCG GCGCTGTCGG GCGGCTCCCC GTTCCGCCAC
TTTCGGAACG AAGCGCAACG GAACCGGAAA GGACAGATGG CCAGATCGCG CGACTATCGC
CTAGGCAGCC AGGATTTCCC GCGCGGCTGG TTCATGGTGG CGGACGCGGC GACGCTTCAG
CATGGCCAGC CGTTGGCCGT GCGCTTCTTT GGCCGCGACC TTGTCCTCTA TCGTGGCGCG
GACAGCGGGA GGCCGATTCT CGTCGACGCC TATTGCCCGC ACATGGGCAC GCATCTCGCT
CGCAACCATA CGTCCTATGT CGTGCGGGAC GGCAGCCAGA TCGAAGGTGA CACGATCCGC
TGCCCCTATC ACGCCTGGCG CTTCGATGCC GAGGGGCGTT GCATCGACAT TCCCTACGCT
CCAGGGGCGA AAATTCCATC TGCCGCGCGG ATCGCCAGCT GGCCGGTGGT CGAGCGCTGG
GGTGCCGTCT TCGCCTGGCA CGATCCGGAC GGCGGGGAGC CCGACTGGGA GTTGCCCGCG
CTCGCGGCAT GGGACGATCC GGCCTGGGTG CGCTGGCGTT TCGACGATTT CGGCGTGCTC
GATCGCCACC CGGTGGAGAT CGTCGACAAT ATGGCCGATG TCGCCCATCA GGAGCCGATC
CACGGCCAGA CCGTCCGATA TTTCGAGCTC GAGCTGGATG GGCACCGGGC GATCCATCGC
GAGGGCGGTG TCAGCCGGAC CAGCCTGACG GCGGATGATG CGCTGCTGTG CATCGACGCC
GTCTATCATG GACCCGGCTT GCTGCTGACG GAGATGCTCG GCCGTTACCC CAGCTACTTC
CTGATCGCGC ACACGCCTGT GGACGACGGC TCGATCCGCG TCTGGCACGC GGTGATCGTC
AAATCGCCGC ACGAACGGGC GACCGACGAG GACGTCGCCA TGGCCCGCGC CTTCCAGGAG
CAGAGCAGGC TCGCCTTCGC GCAGGACTTC GAGATCTGGA CGCACAAGCG GCCGGCCCTC
ACCATCCTGC AGATTCCGCA TGACGGCCCC TATGACAAGC TGCGGACATG GTATCGCCAG
TTCTACAATC CGCGCGGACC ATCGGATCGC GCGAGGACGA CGCATGGCGT GCGCGGCATG
CCACGCAACC TGGATCGGAC GGACAACAGG GAGGATGGAA GCAGCGATGA CCTATAG
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| Protein sequence | MKPSCFLPMA ALSGGSPFRH FRNEAQRNRK GQMARSRDYR LGSQDFPRGW FMVADAATLQ
HGQPLAVRFF GRDLVLYRGA DSGRPILVDA YCPHMGTHLA RNHTSYVVRD GSQIEGDTIR
CPYHAWRFDA EGRCIDIPYA PGAKIPSAAR IASWPVVERW GAVFAWHDPD GGEPDWELPA
LAAWDDPAWV RWRFDDFGVL DRHPVEIVDN MADVAHQEPI HGQTVRYFEL ELDGHRAIHR
EGGVSRTSLT ADDALLCIDA VYHGPGLLLT EMLGRYPSYF LIAHTPVDDG SIRVWHAVIV
KSPHERATDE DVAMARAFQE QSRLAFAQDF EIWTHKRPAL TILQIPHDGP YDKLRTWYRQ
FYNPRGPSDR ARTTHGVRGM PRNLDRTDNR EDGSSDDL
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