| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Swit_2044 |
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| Symbol | |
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| ID | 5200881 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Sphingomonas wittichii RW1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009511 |
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| Strand | + |
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| Start bp | 2293528 |
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| End bp | 2295216 |
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| Gene Length | 1689 bp |
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| Protein Length | 562 aa |
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| Translation table | 11 |
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| GC content | 68% |
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| IMG OID | 640581588 |
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| Product | glucose-methanol-choline oxidoreductase |
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| Protein accession | YP_001262541 |
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| Protein GI | 148554959 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG2303] Choline dehydrogenase and related flavoproteins |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 24 |
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| Plasmid unclonability p-value | 0.544058 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 19 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | GTGGCGCGTG ATATCGAAGA GTTCGACTAT ATCGTGGTCG GCGCGGGCTC GGCCGGATGC
GTTCTCGCGG CCCGCCTGTC CGAGCCACCC GGTCTGCGGG TCCTGCTGCT GGAGGCGGGC
GGACGCGGTT GGAATCCGCT GCTCCATATC CCCGCCGCCG CGTTCCTGCC GATCGCCAGC
CGGCATGCGC GCTGGCTTTA TGCCACCGCG CCGCAGGAAA GGCTGGACGG CCGGGTATTG
GGCGAGATCC GGGGCAGGAC CGTTGGCGGC ACGAGCGCCA TCAACGGGAT GCTCTACAGC
CGGGGGGAAC CGGCCGACTA TGACGGCTGG GCGGCCGGCG GGGCTCCCGG ATGGTCCTAT
CGCGAGGTGC TGCCCTATTT CCTGAAATCG GAAAGACATC TCGACGGCCC TTTGCCCGGC
CACGGCGGCG ACGGGCCGTT GAAGGTATCG CGTGCGCCCC TCGCCAATCC TCTCGCGCGC
CGCTGGATCG CCGGTGCGAT GGAGAACGGT CATCGTTTCC ACGCCGACAT GAGTGCCACC
GACGATGAAG GCGTCGGTCC GTCGGACTGG ACCTGTGCGG GCGGACGGCG GGCCAGCGCG
GCCGCGTTCC TCGCCGCCGC TCGCGGTCGA GGCAATCTGA CGATCCGTAC CCATTCGACG
GCAACGCGCA TCATCATCGA GAACGGCCGG GCGTGCGGCA TCGCCTATCG CTGCCGAGGC
AGGCTCCGGG AAGCACGAGC GGCGCGCGAG ATCGTCCTTG CCGCCGGCGC GATCCAGTCG
CCGCAACTGT TGATGCTTTC GGGACTGGGG CCGGCGACGC AACTCAAGGC GTTCGGCATT
CCGGTCGCGG CCGATCTTTC CGGCGTCGGC GCCAATTATC ACGATCATGT CGGCGCGTCC
GTGCTGGTGC GCAGCCGTGG CCGGGATTCG GCCTATCGCC ATTTCTCGCC CGGTGCCGCG
CTCGTCGAAG GGCTCCGCTA TCTGTTCCAG GGCAAGGGCG CCCTTGCAGA ACCTCCTTTG
GAGGCCGTCG GCATCTTCCG GTCCGGCGAG GCGCCCGACA TAGGGCCGGA CCTGAAGCTC
GGCTTCATTC CCCTCATGGT CGCCCCCTCG GGGCGTCTGG TACGCGAGCC GGGGTTCATG
ACGCGCATCT GCATGACCAA GCCGGCCAGC CGAGGCTTCA TCCGTCTTCG TTCGTCCTCT
CCCGACGATC CGCCGGTGAT CGATGCGCGT TACTTCGCCG AGGAGATCGA CCTCCGCCGC
ACCCGCGCGG GCATCCGCAT CGCGCGCGAG ATCGTCGCCG GACGGGCATT CGACGACGTG
CGCGGAGAAG AACTCGCGCC CGGTTCGGCC GCCGCCGGCG ACGATGATCT GGACCGCTTC
CTGCGCTGGA CCGCCGGTCC CGATTTCCAT GGCGTCGGCA GTTGCCGCAT GGGAAGCGAC
GCCGATGCGG TGGTCGATGA ATCGTTGGCG GTGCGGGGCG TCGCCGGCCT GCGCGTGGCG
GATGCCTCGA TCATGCCGAC CGTGCCGGGC GGCAATACCA ATGCGCCGGC GATGATGATC
GGCGAAAAGG CGGCGGATAT CATCCTCGGC AATCCGCCGA TCGCTCCACC GGCACTCCCG
TCTGCCGCGC TTTCTGCGTG TTTATGTCAT GGCGGTCCGG GCTCACCGGC CGCTACATTC
GAAGAATAG
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| Protein sequence | MARDIEEFDY IVVGAGSAGC VLAARLSEPP GLRVLLLEAG GRGWNPLLHI PAAAFLPIAS
RHARWLYATA PQERLDGRVL GEIRGRTVGG TSAINGMLYS RGEPADYDGW AAGGAPGWSY
REVLPYFLKS ERHLDGPLPG HGGDGPLKVS RAPLANPLAR RWIAGAMENG HRFHADMSAT
DDEGVGPSDW TCAGGRRASA AAFLAAARGR GNLTIRTHST ATRIIIENGR ACGIAYRCRG
RLREARAARE IVLAAGAIQS PQLLMLSGLG PATQLKAFGI PVAADLSGVG ANYHDHVGAS
VLVRSRGRDS AYRHFSPGAA LVEGLRYLFQ GKGALAEPPL EAVGIFRSGE APDIGPDLKL
GFIPLMVAPS GRLVREPGFM TRICMTKPAS RGFIRLRSSS PDDPPVIDAR YFAEEIDLRR
TRAGIRIARE IVAGRAFDDV RGEELAPGSA AAGDDDLDRF LRWTAGPDFH GVGSCRMGSD
ADAVVDESLA VRGVAGLRVA DASIMPTVPG GNTNAPAMMI GEKAADIILG NPPIAPPALP
SAALSACLCH GGPGSPAATF EE
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