Gene Swit_2043 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSwit_2043 
Symbol 
ID5200880 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSphingomonas wittichii RW1 
KingdomBacteria 
Replicon accessionNC_009511 
Strand
Start bp2292912 
End bp2293505 
Gene Length594 bp 
Protein Length197 aa 
Translation table11 
GC content58% 
IMG OID640581587 
Producthypothetical protein 
Protein accessionYP_001262540 
Protein GI148554958 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones29 
Plasmid unclonability p-value0.424976 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones18 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGGCGATC AGGCCCGCAA TCCTGGAGGG TGTGCGATGA GCGACGAGAA CAATCTGGGC 
AAGATCGCCT ATGCGGGCGC TACCGCCGCG GCGAAGGCCT GGGAGCAAAT CCGCCATTCG
ACCCACATCT TCCCCGAAGC CGAAGTGGAA GCCGCGTTTC AGGACTATGT GTATCGCGCG
AACATCAACG ACTGGGGTTA TTATTCCGAA CTGTTCACGG ACCCCTGCGT TTATGTCGAC
CATCATTTCG GCACGGTCCG CAACCCGAAG GAACTGGCCG ACTGGATGAT TCCGCTGATG
AAGACCCAGC CCGAGATGCG CTTCATTCCT GGTTGGCACG TCATCCAGGG CAATCTTCTC
ATCAACTATA ACTGGAACCG CTGGCCCAAT CCCGAAGGCA GCGCCGTTCC CTATGACGAG
TGGCGCAATC CCGGCCCGAT CAGCGACTAT CGCTTCCAGT TTCCATGCGT CACGATGTGC
ATCTATGCCG GCGACGGCAA ATTCTCCTTC GAAGAGGATA TCTACAGCCC GTCCGCCTAT
CACGAGATCC TCAAGCAGTG GCGACAAGCC ATGGGCATGG AAGACGCGGG CTGA
 
Protein sequence
MGDQARNPGG CAMSDENNLG KIAYAGATAA AKAWEQIRHS THIFPEAEVE AAFQDYVYRA 
NINDWGYYSE LFTDPCVYVD HHFGTVRNPK ELADWMIPLM KTQPEMRFIP GWHVIQGNLL
INYNWNRWPN PEGSAVPYDE WRNPGPISDY RFQFPCVTMC IYAGDGKFSF EEDIYSPSAY
HEILKQWRQA MGMEDAG