| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Swit_2041 |
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| Symbol | |
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| ID | 5197431 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Sphingomonas wittichii RW1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009511 |
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| Strand | + |
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| Start bp | 2289308 |
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| End bp | 2291662 |
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| Gene Length | 2355 bp |
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| Protein Length | 784 aa |
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| Translation table | 11 |
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| GC content | 66% |
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| IMG OID | 640581585 |
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| Product | TonB-dependent receptor |
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| Protein accession | YP_001262538 |
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| Protein GI | 148554956 |
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| COG category | [P] Inorganic ion transport and metabolism |
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| COG ID | [COG1629] Outer membrane receptor proteins, mostly Fe transport |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 22 |
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| Plasmid unclonability p-value | 0.573834 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 16 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGTGCACA GCAATCTTGT CGTTCGTCTG ATGGCCACGG CCTGCATCGC CGGATGGATG
ATACCGGCGA TGGCTCAGCC CATGGATCAG GACCGTGCGG CGACAGCGGA GACGGACGGC
CTGGGTGACA TCGTCGTCAC CGCCCAGAAG CGCGAGGAGC GGTTGCAGGA CGTGCCGATC
GCGATCTCCG CGATCGGCGC CGATTTCCTG CGGAGCCGCG ACATCGGCTC GATCGACCAG
ATCGGCACGA TCGCACCGAA TGTGAAGGTC GAACGCTCCC CTACCAACAA GACCGTCTCG
CAGATCGCGA TGCGCGGTTC GGTGACCGTC AATCCCTCGG TGCTGTTCGA GCCGGCGGTC
GGCCTCTATG TCGACGGCGT CTATATCGCC AAGGCCCAAG GATCGATCTT CGACATCGCG
GACCTCGAAC GCGTCGAGGT GCTGCGCGGG CCGCAGGGCA CGCTCTATGG GCGCAACACG
CTGGCCGGCG CGATCAATCT CGTGACACGC AAGCCCTCGG GCGAGCTTCG AGGATCGATC
GAGGCGAGCT ACGGCAATTA CGACATGAAG CGGGTGAAGG GCACGATCGA CCTGCCCGCG
TTCGGCATCT TCTCGATCAA GCTGTCGGGT CAGGCGCAGA AGCGCGACGG GTTCATCGAT
GTCGTGCCCA ATCCCTATCC GCAGGCCTTC CTGGCGCGGC CCAGTTCGGT GGACGACACC
AACGACCTCA ACCAGCGAAG CCTGTTCGCG CAAGTGCGGG TGCGGCCGGC CGACAGCCTC
ACGATCGACT ATGCCTATGA CTACAGCCGC TATCGCCAGC GCCCTGATTT CGCGCAGCTC
CACAGCTTCA ACCGCAACGG CCTGCCGCAG GATATCTTCG ACCCGAACTC GCCGGGCTAT
GCGGGGGCCG GCGCCTTCTT CCCGCTCGAC CTCTATGTGC GGGCCCAGCG GCAGTCGTCC
GCCAGCCTCG ACGCGGACCA GCTGTACGAG CGGCTGCGCA CGGACGGCCA TTCGCTTACC
CTGGCATGGG ATCTGGGAAC TGCCGAACTC AAATCGATCA GCGCCCATCG CCGCACCCGG
TGGAGCGACG CGCTCGATCT CGACGGGTCG CCGCTGCCGG TCGGCGCCAC CCAGCGCTTC
ACCCGCTACC GTTCGTTCAG CCAGGAGCTG CAACTCACCG GCGGTCTGGC GGACGGACGG
CTGAAATATG TCGTCGGCGG CTATTATTTC CGCGACAAGG GCGAAACGCT GGGGCCGCAA
TCCTTCTTCG CGGGCGCCAC CAGCTTTCAG GCCGATTATG GCCAGCACAC CAGGGCCGCC
GCCGCTTATG CCCAGGTCGA TTTCGACCTG ACCGACCGGC TCGTGCTGAC CGGCGGCATT
CGCTACAATC ATGAGCGCAA GGACGTCAGC CGGCTGCTGG TCAGCGGCCC CGGAACGCCG
GCCGAGCTGA CGCTGATCGA CATCGGCTAT GGCGACGTGC CCGATGCGGT CTACAACAGC
TTCAGCCCGG CCGCCTCGCT GCGCTTCGAC CTGACCGAGC GGGTGAACGT CTACGCCCGC
TATGCCCGCG GTTTCAAATC GGGCGGCTTC AACGGCGAAA CGACCGAACT GGTCGCCGCC
ACGACCGCCT GCCCGTCGGG CGCGATCGAA CTTTGCCAGC CCTACCGCCC CGAAAAGGTC
GACAGCTATG AGGTGGGGCT GAAAAGCCGG CTGCTCGACA ACCGGCTCCA GCTCAACATC
GCCGCCTTCT GGGACGAGCA TCGCGACATC CAGCTTTCCG TGTTCCGGGG CAGCGGCGCG
CTGTCGCTGT CGGTGCTCAA CGCGGCGTCG TCGCGGATTC GCGGGGTCGA GCTGGAATTC
ACCGCGCGTC CGTCGTCCGC CTTCACCGTC AGCGGATCGT TCGCGCTGCT CGATGCCAAA
TATAAGCGCT TCATCGACGG CGGGGTGGAC GTCTCCGACA ATCGCGCCTT CCCGCACGCG
CCGCGCTACA CCGCCTCGGT TTCGACCGAC TGGCGCGTGA TCGAGGGCGA TTGGGGACGG
CTCAATCTGC TGGCCGACCT GAATTTCGTC GATTCCTACT ACACCTATCC CTATGCGCTC
GCCGCCCCGC CGTCGACCAC GCAGGTCGCG GGCAACAGCG AGGCTCCCTC GCGCGCGATC
GTCAATGCGC GCGCCATCCT CGCCGATCTG CCGATCGGCG GGATGAAAGG CGAGATCTCG
CTCTGGGCGC GCAACCTGTT CCAGCAGCGC AGCCCCAGCA ACTTCATCGA TTTCGGGCCG
AGCTTCGGCG GCATGACGCT CGCCTTCTAT CCCGATCCGC GCACCTTCGG CGCGACGTTC
GGCCTCCGCT TTTGA
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| Protein sequence | MVHSNLVVRL MATACIAGWM IPAMAQPMDQ DRAATAETDG LGDIVVTAQK REERLQDVPI
AISAIGADFL RSRDIGSIDQ IGTIAPNVKV ERSPTNKTVS QIAMRGSVTV NPSVLFEPAV
GLYVDGVYIA KAQGSIFDIA DLERVEVLRG PQGTLYGRNT LAGAINLVTR KPSGELRGSI
EASYGNYDMK RVKGTIDLPA FGIFSIKLSG QAQKRDGFID VVPNPYPQAF LARPSSVDDT
NDLNQRSLFA QVRVRPADSL TIDYAYDYSR YRQRPDFAQL HSFNRNGLPQ DIFDPNSPGY
AGAGAFFPLD LYVRAQRQSS ASLDADQLYE RLRTDGHSLT LAWDLGTAEL KSISAHRRTR
WSDALDLDGS PLPVGATQRF TRYRSFSQEL QLTGGLADGR LKYVVGGYYF RDKGETLGPQ
SFFAGATSFQ ADYGQHTRAA AAYAQVDFDL TDRLVLTGGI RYNHERKDVS RLLVSGPGTP
AELTLIDIGY GDVPDAVYNS FSPAASLRFD LTERVNVYAR YARGFKSGGF NGETTELVAA
TTACPSGAIE LCQPYRPEKV DSYEVGLKSR LLDNRLQLNI AAFWDEHRDI QLSVFRGSGA
LSLSVLNAAS SRIRGVELEF TARPSSAFTV SGSFALLDAK YKRFIDGGVD VSDNRAFPHA
PRYTASVSTD WRVIEGDWGR LNLLADLNFV DSYYTYPYAL AAPPSTTQVA GNSEAPSRAI
VNARAILADL PIGGMKGEIS LWARNLFQQR SPSNFIDFGP SFGGMTLAFY PDPRTFGATF
GLRF
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