| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Swit_2039 |
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| Symbol | |
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| ID | 5197429 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Sphingomonas wittichii RW1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009511 |
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| Strand | - |
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| Start bp | 2287649 |
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| End bp | 2288629 |
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| Gene Length | 981 bp |
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| Protein Length | 326 aa |
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| Translation table | 11 |
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| GC content | 62% |
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| IMG OID | 640581583 |
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| Product | AraC family transcriptional regulator |
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| Protein accession | YP_001262536 |
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| Protein GI | 148554954 |
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| COG category | [K] Transcription |
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| COG ID | [COG4977] Transcriptional regulator containing an amidase domain and an AraC-type DNA-binding HTH domain |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 27 |
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| Plasmid unclonability p-value | 0.28183 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 16 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCTTGAAG AAGACTTGCC TGCCCTTGAA GGACATCGTG TCTTTGCATC CCGCGATGTA
GAGGAAACCG AAGCCCAGAT TTCGGCCCTG TTGCAGCCGC ATCGCTTGAG ACCGACGACG
ATTTCCGCAG ACTATCATGC CAATATGGAT TTCTTCCGCT TTTCATCGAT CGGCGTGGGT
TCGATCGCCT ATTCGCGGCC CATGTCGCTC CAATTGGAGG AAATAGCCGA TTATTATCTG
CTGATGTTCT GTCGCCGGGG TAGCGCGCGA TTGATCCGCA ATGGCGGCGA GGAATGGGTC
GGTCGGCGCC ACGGCGTCTG CATCGCGCCC GGCGAACCGC TCCACGCCGA ATTCACCGAC
GACTGCGAAC AGATCGTCTT CAAGGTGGAT GCTCGTACGC TATGTCGCCA CGCCGGCCGC
AAGGCTCCCT TGATGCGCCA GCGAATTGAT CTGGCCGACA CGCTCTTCGC GCCGTGGAGG
ACATTCGTGC GCGGCATGCT CAGCGACCCG GCGACCGTCG ATTTCGCGAC GAGCAACACG
CGCGTCGCCG CGGAATATGA AAGCCTGTTC CTGTCGACGC TGCTGCAGGG CGGTTTGGTC
GACAACGGTC GGGCCGATAG CGGTATCGCG CCAATCTCCG TAAAGCGCGC GGAGGCCTAT
ATCGACGACC ATTTCGCCGA TCCGATCACG TTGGACGACA TCGCGGCGGC AGCCGGCGTG
CCGGCCAGGA CGCTGCTCAA CGGGTTCCGC CGGTTCCGTG ACACCTCGCC GATCCGGGCA
TTGCGCGAGC GGCGATTGAC CGCCGCGCAT GAACGCTTGC TGGCGGCCGA GTCCGACCAG
TCGATCCTCG ACATCGCACT CGACGTGGGC TTCGGCCATC CGGGCCGGTT CGCGCTGGCC
TATACCGAGC GCTTCGGAGA AAAACCGTCG ACGACCCTGC GTCGGCGGCG TTTGACGAAC
CTGCCGACGC ACCGGCAATG A
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| Protein sequence | MLEEDLPALE GHRVFASRDV EETEAQISAL LQPHRLRPTT ISADYHANMD FFRFSSIGVG
SIAYSRPMSL QLEEIADYYL LMFCRRGSAR LIRNGGEEWV GRRHGVCIAP GEPLHAEFTD
DCEQIVFKVD ARTLCRHAGR KAPLMRQRID LADTLFAPWR TFVRGMLSDP ATVDFATSNT
RVAAEYESLF LSTLLQGGLV DNGRADSGIA PISVKRAEAY IDDHFADPIT LDDIAAAAGV
PARTLLNGFR RFRDTSPIRA LRERRLTAAH ERLLAAESDQ SILDIALDVG FGHPGRFALA
YTERFGEKPS TTLRRRRLTN LPTHRQ
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