| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Swit_2025 |
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| Symbol | |
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| ID | 5200937 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Sphingomonas wittichii RW1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009511 |
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| Strand | + |
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| Start bp | 2271477 |
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| End bp | 2273141 |
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| Gene Length | 1665 bp |
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| Protein Length | 554 aa |
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| Translation table | 11 |
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| GC content | 71% |
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| IMG OID | 640581569 |
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| Product | protein of unknown function DUF894, DitE |
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| Protein accession | YP_001262522 |
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| Protein GI | 148554940 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG2814] Arabinose efflux permease |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 25 |
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| Plasmid unclonability p-value | 0.530345 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 15 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | TTGAGCGACG CCGCGCGGGA GGACGCCTCC GGCCCGGCCA TGACCGCCGC GCTGCGCGTG
GCGCGCTTCC GGCTGATCTG GACGGCCAGC GTGCTGTCGA ACCTGGGACT CATCATCCAG
GGCGTCGGCG CGGCCTGGGC GATGACCGAG GAAACCGGCG ACGCGACGCT GGTCGCGATG
GTGCAGAGCG CGACCATGCT GCCGATGCTG CTGTTCACCC TGCCGGCGGG CGCGATGGCC
GACATGTACC CGCGCCGGAT CGTCGCGCTG TTTGCCCTGA CGGTGTCGCT GGCCGGCGTC
TCGACCCTGT TCGGGCTGTC GCTGGCGCAG GCGACCACGC CCCCCGCGCT GCTCGCGCTG
AGCTTCGTCG CCGGGTGCGG GATGGCTTTC TTCTGGCCGG CCTGGCAGTC CTCGGCAAGC
GACGACGTCC CGGCCGAATT GCTGCCCGCC GCCGTCGGCC TCAACAGTCT CAGCTACAAT
GCCGCCCGGG TGGTGGGCCC GGCCGTCGGC GGGCTGATCG TCGCGATGGG CGGCACGGTC
ATCGCCTTCG GGATCAGCGT GCTGCTCTAC CTGCCCATGG TCGGCGCCCA GCTTCGCCCG
GCCCCGCGGC GGGAGATACC GCGACTGCCC CCGGAGCGGA TCGGCCGGGC GCTCATCTCG
GGCATACGCT ATGTCCTCCA TTCGCCCGCG ATCCTCAGCA TCGTGATCCG CGCCTTCATC
CTCGGCGCAT TGGGCGGATC GGCGCACACG CTGATGCCGC TCATCTCCCG CGACCTGCTG
GCGTCCGGCG CGAACGTCTT CGGCATCCTG CTCGGAACCT TCGGGGCCGG CGCGGTGCTG
GGCGTCTTCA TGGCGCCGAC GCTGCGCAAC CGATATGGCG CGGACGGCAG CGCCTCGCGC
TGCATCGTCG CGCTGGGGAT CAGCCTCGCC GTCGTCGGCA CCAGCCGCTC GGTGCCGCTC
ACGGCCGTCG CGCTGCTCGT CGCGGGATCG GTCTGGATGT GCGTCACCCA GGCCTGCAAC
GTCAGCCTGC AGATGCTGGT GCCGCGCTGG GTCGCCGGGC GGGCTGTCGC CTGCTTCCAG
GCCAGCCTTT CAGGCGGGAT CGCGCTGGCC GGAGTCGGCT GGGGCATGGT TGCCGGCCAT
TTCGGCGTCG GCCACGCCTT CCTGGCATCG GGGATCCTGG TCGCGCTCTC GATCGTCGTC
GGACGGGTCT GGCCGCTGCC GGAGATCGAA AGCACCTATG TGGTTCCGGG CGAAAGCCTG
CCCAATCCAC AGGTCCTGCT GCCGATCAGC GGACGGAGCG GGCCGATCCT CGTCGAGATC
GAATATCGGG TGCCGCCCGC CGAGGCGCGC GCCTTCTATC GCATGATCCA GGACGTCCAG
CTCTGCCTCA AGCGCAACGG CGCCTATGGC ACCTCGATCG CGCGCGACCT CGGCGACCCG
GAGGTCTGGA TGGAGCGCTA CCATTTCCCG ACCTGGCACG ACTATCTCCG CCAGCGCGAC
CGCATGACCG CCGCCGAGCG GACATTGCAG GACGCGCTGC TCGCCTTTCA CGCCGGCGAC
CGACCGGTCC GCGCCCGGCG TTTCCTCGAA CGGCCGTTCG GCTCGGTCCG CTGGGACGAG
GACAGCGCCG ATCACCGCAC CCCCGAAACC CTGCCGATAG GATGA
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| Protein sequence | MSDAAREDAS GPAMTAALRV ARFRLIWTAS VLSNLGLIIQ GVGAAWAMTE ETGDATLVAM
VQSATMLPML LFTLPAGAMA DMYPRRIVAL FALTVSLAGV STLFGLSLAQ ATTPPALLAL
SFVAGCGMAF FWPAWQSSAS DDVPAELLPA AVGLNSLSYN AARVVGPAVG GLIVAMGGTV
IAFGISVLLY LPMVGAQLRP APRREIPRLP PERIGRALIS GIRYVLHSPA ILSIVIRAFI
LGALGGSAHT LMPLISRDLL ASGANVFGIL LGTFGAGAVL GVFMAPTLRN RYGADGSASR
CIVALGISLA VVGTSRSVPL TAVALLVAGS VWMCVTQACN VSLQMLVPRW VAGRAVACFQ
ASLSGGIALA GVGWGMVAGH FGVGHAFLAS GILVALSIVV GRVWPLPEIE STYVVPGESL
PNPQVLLPIS GRSGPILVEI EYRVPPAEAR AFYRMIQDVQ LCLKRNGAYG TSIARDLGDP
EVWMERYHFP TWHDYLRQRD RMTAAERTLQ DALLAFHAGD RPVRARRFLE RPFGSVRWDE
DSADHRTPET LPIG
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