| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Swit_2024 |
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| Symbol | |
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| ID | 5200936 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Sphingomonas wittichii RW1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009511 |
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| Strand | - |
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| Start bp | 2268917 |
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| End bp | 2271271 |
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| Gene Length | 2355 bp |
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| Protein Length | 784 aa |
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| Translation table | 11 |
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| GC content | 71% |
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| IMG OID | 640581568 |
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| Product | quinoprotein glucose dehydrogenase |
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| Protein accession | YP_001262521 |
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| Protein GI | 148554939 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG4993] Glucose dehydrogenase |
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| TIGRFAM ID | [TIGR03074] membrane-bound PQQ-dependent dehydrogenase, glucose/quinate/shikimate family |
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Plasmid Coverage information |
| Num covering plasmid clones | 23 |
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| Plasmid unclonability p-value | 0.963256 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 14 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGCGGAGG AAGACGGACA GCGGCAACGG GGCGGCCTCA GGCGCGTGCT GGAACGCGCG
TTCGCGGGGA TATCGTTGCT GGCGGGCATG GGGATGGCGC TGCCCGGCGC CTATCTGCTG
ACGCTGGGCG GGTCGGCCTA TTATCTGGTG GCGGGCGTGC TGCTGGTCGC CGCCGCCGTC
GAACTGTGGC GGGGCCGGGC GCGCGGCGCT TGGCTGTTCC TGCTCGTCTG GCTCGGAACC
CTCGGCTGGG CGCTGTGGGA GGCCGGCCTC GACGGCTGGG CGCTGCTGCC AAGGCTCGGC
CTGCTGACCG GCATGGGCAT CGCCCTCGCG TTGATCCGCT GGCGGCCGAG GAGAGGGACG
GTCCGGATCG CGGCGACCGG TGCCGCCGCC ATCGCCTCGC TGGCAGGGAT CGGCCTGGCC
CTGACGGGAT CGCACGGCAA CGCCTCGCTG CCGCTGGCCG CTTCACCAGC CACCAGCGCC
GCCGACGGCG AGTGGCAGCA TATCGGCCGC ACGGCGGGCG CCGATCGCTT CTCCCCGCTC
GACCAGATCA CCCCGGCCAA TATCGGCAAG CTTCGGGTCG CCTGGACCGC CCATCTCGGC
ATGCCGCCCA AGGGCCTCGC CGGCACCATC GAGGCGACCC CGCTGATGGT CGGCGACACC
CTCTACACCT GCAACATGAA CAATGCCGTC ATCGCCATCG ACCCCGATAG CGGAAAGACC
AGATGGGCCT TCGATCCGAA GATCGATCCG GCCGGGGTGG CCATGGCGGT GTGCCGGGGC
GTGGCCTATC ACCGCCAGCC GGGAGCGGCC GGCCCCTGCG CCGCGCGAAT CTTCGTGGCG
ACCCTGGACA ACCGGCTCAT CGCGCTCGAT GCCGCCACCG GCCGGCGCTG CCGGGATTTC
GGCAGGAACG GCGAGGTGAG CCTGCTCGAC GGCATGGGCG ACGTCCCCAA GGGCTATTAT
TATCCGACAT CGCCGCCAGC CGTGATCAGG GACCGGCTGG TGATCGGCGG CCGCGTCGCC
GACGGGCAGA TGGTCAACGA GCCGTCGGGG GTGATCCGGG CGTTCGACGC GATGACCGGC
AGGCTCGCCT GGGCCTGGGA CATGGGCCGT CCCGACCGGC ACGGCCTTCC CCCGGCGGGC
GAGACCTATA CCCGCGGCAC CCCCAATGCC TGGCCGCCCA TCTCGGGCGA CGACAGGCTC
GGCCTCGCCT TCGTCCCGCT CGGCAATCCG ACGCCCGACT ATGTCATGTC CCACCGCACG
CCCGAGATGC GCCGCTATGG CAGCTCGGTC GTCGCCCTCG ACGTCGAGAC CGGCAAGGAG
CGCTGGCACT ACCAGACCAC CCATCTCGAC GTCTGGGACT ATGACCTGCC CGCCCCCGCC
AGCCTGGTCG ACTTCCCCAC CGCCCGGGGC CTGCGCCCCG CGCTGATCCA GCCGACCAAG
CGCGGCCAGT TCTTCGTGCT CGACCGCGAG ACCGGCAAGC CGCTGGTCGA GACGGTCGAG
CGCGCCGTGC CCCAGGGCGC CGCGCCGGGC GAGAGCCTGT CGCCGACCCA GCCCTATCCG
GTCGGCATGC CCTCGCTCGC CGGACCCCGG CTCAGCGAGG CCCGCATGTG GGGCATCACT
CCGTTCGACC AGATCTGGTG CCGCATCCGC TTCAGGCAGG CCCGCTACGA CGGCGAGTTC
ACCCCTGTCG GCGCGGACCG GCCGAGCATC GTCAGTCCCG GCTATTTCGG CGGCAGCAAC
TGGTCGGGCA TCTCGATCGA TCCCGAGCGC CGGGTCATGG TCGCCAACGT CATGCACTTC
CCGATGTACA ACCAGCTGAT AGCACGGGCC GACGCCGATC CGGCGGTCTT CCAGCCCGCC
CGCGTCGGCA GGCATCCGAT CAGCGGGGAG AATTGGGCGC AGCAGGGCAC GCCCTATGCG
GTCAGGACCG TGCCCTTCGT CTCGCCGCTC AAGATCCCGT GCAACCAGCC GCCCTATTCG
GAGATCGCGG CGGTCGACCT CGGCAGGCGC GCCGTCCTGT GGCGGGAGCC GCTGGGCACG
GCGCGCGATA CCGGCCCGTG GAACGTCGCG TCGCATCTCC CGATCAGGGT GGGCGTGCCG
GCGCTGGGCG GAACGCTCGT CACCCGTTCG GGCCTGGTCT TCATCGCGGC GACGCAGGAG
CGGGCGTTCC GGGCCTTCGA CCTGCGATCG GGGCATCTGC TCTGGCAGGA TCGCCTGCCG
GCGGGCGGGC ACGCCAACCC GATGACCTAC CGGTCGCCGC GCACGGGCCG CCAATATGTC
GTGATCCCGG CCAGTGGCCA TTCGCGCTTC GCGAACGGAA GCGCCGACCT GCTGGTCGCC
TATGCGCTCC CCTGA
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| Protein sequence | MAEEDGQRQR GGLRRVLERA FAGISLLAGM GMALPGAYLL TLGGSAYYLV AGVLLVAAAV
ELWRGRARGA WLFLLVWLGT LGWALWEAGL DGWALLPRLG LLTGMGIALA LIRWRPRRGT
VRIAATGAAA IASLAGIGLA LTGSHGNASL PLAASPATSA ADGEWQHIGR TAGADRFSPL
DQITPANIGK LRVAWTAHLG MPPKGLAGTI EATPLMVGDT LYTCNMNNAV IAIDPDSGKT
RWAFDPKIDP AGVAMAVCRG VAYHRQPGAA GPCAARIFVA TLDNRLIALD AATGRRCRDF
GRNGEVSLLD GMGDVPKGYY YPTSPPAVIR DRLVIGGRVA DGQMVNEPSG VIRAFDAMTG
RLAWAWDMGR PDRHGLPPAG ETYTRGTPNA WPPISGDDRL GLAFVPLGNP TPDYVMSHRT
PEMRRYGSSV VALDVETGKE RWHYQTTHLD VWDYDLPAPA SLVDFPTARG LRPALIQPTK
RGQFFVLDRE TGKPLVETVE RAVPQGAAPG ESLSPTQPYP VGMPSLAGPR LSEARMWGIT
PFDQIWCRIR FRQARYDGEF TPVGADRPSI VSPGYFGGSN WSGISIDPER RVMVANVMHF
PMYNQLIARA DADPAVFQPA RVGRHPISGE NWAQQGTPYA VRTVPFVSPL KIPCNQPPYS
EIAAVDLGRR AVLWREPLGT ARDTGPWNVA SHLPIRVGVP ALGGTLVTRS GLVFIAATQE
RAFRAFDLRS GHLLWQDRLP AGGHANPMTY RSPRTGRQYV VIPASGHSRF ANGSADLLVA
YALP
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