| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Swit_2022 |
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| Symbol | |
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| ID | 5200934 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Sphingomonas wittichii RW1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009511 |
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| Strand | - |
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| Start bp | 2263480 |
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| End bp | 2266914 |
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| Gene Length | 3435 bp |
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| Protein Length | 1144 aa |
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| Translation table | 11 |
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| GC content | 69% |
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| IMG OID | 640581566 |
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| Product | indolepyruvate ferredoxin oxidoreductase |
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| Protein accession | YP_001262519 |
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| Protein GI | 148554937 |
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| COG category | [C] Energy production and conversion |
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| COG ID | [COG4231] Indolepyruvate ferredoxin oxidoreductase, alpha and beta subunits |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 26 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 14 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | GTGATTGTGA CGGCGAATGC GAACAGCATA GAAGGCGAGG GCGAGATCCT TTCCGGCACC
CAGGCGCTCG TGCGCGGCAT GATCGCGCAG GCCGAGGACG ATCGTGCCCG GGGGTGGAAT
ACCGCCGGCT TCGTCTCGGG CTATCGCGGG TCGCCGTTCG GCAATGTCGA TCTCGAACTG
TGGCAGGCGC AGGAGGCGCT GGAGGCCCAT TCGATCCTGT TCCAGCCCGG CCTGAACGAG
GACATGGCCG CGACCGCCTG CTGGGGCACC CAGCAGGTGC CGCTGATGGA GAATCCGCGC
TACGAGGGCG TGTTCGCCTT CTGGTACGGC AAGGGGCCGG GCGTCGACCG CTCCGGCGAC
GTCTTCAAGC ATGGCAACCT CGCCGGCACC TCGGCGAAGG GCGGCGTGGT GCTGCTCGCC
GGCGACGACC ATGGCGCGAA ATCCTCGAGC ACCGCGCACC AGTCCGAACA TATGTTCGTC
GCCGCCTCGA TCCCGGTGTT CAACCCGAGC TCGATCGAGG AATATTTCGA ATATCTGCCG
GTGGCGGTTT CGATGTCGCG CTTCGCGGGG ACGTGGATCG GCTTCAAATG CGCCACCGAG
ATCGTCGAGG CGTCGGCCGT CCTGCCGCTG AGGCGGCCCG AGCGCACCCT CGTCCTGCCG
GAGGTGGAGG CGCCGTCGGG CGGCTATCAC ATCGCCACCC AGTTCGCGCC GCTCGCCCAG
GAGGAAAGCC TCTATCGCTA CCGCCTGCCG GCCGCGCGCG CCTTCCTGGC GGCCAATGCG
CTCGACCGGG TGACGCTCGA TTCGCCGCGC CGGATGCTCG GCATCATTGC GCCCGGCAAG
GCGCATGTCG ACGTGCACGA GGCGCTGCGC CTCCTCGGCC TGGACGGTGA ACGCGCCGCG
GCGCTGGGCA TCCGCATCCT GAAGCCGCTC GTCACCTGGC CGCTCGATCC GGCGGCGGCG
CGGCCGTTCG TGGCGGGGCA TCGCGAAGTC CTCGTCGTCG AGGAGAAGCG CTCGCTGGTC
GAATGGCAGC TCGCGCAGAT ATTGCTCGGC ATTCCCGATG CCCAGCGGCC GGCGCTGTCG
GGCAAGACGA CCCCGGCGGG CGCGCCGCTG CTGAACGAAT ATGGCGAGCT CACCGCGACC
AGCGTCGCGC TTGCGCTGGC GGACCGGCTG GAGGCGCTCG ATCTGCTGGA CGCGGGGCTT
CGCGAGGCCC GCGAACGCAT CCGTGCGGAA GCGGCGCAGG CGCGCGGCGC AGGGCCGGTG
GCGCGCGCGC CGATGTTCTG TTCCGGCTGT CCGCATAACC GTTCCACCCG CGTGCCCGAG
GGCAGCGAGG CGCTGGGCGG CATCGGCTGC CACGGCATGG CGATGTGGAT TCCCGACCTG
CGGACCAGGC CGTCCACCCA TATGGGCGGG GAAGGGGGGA CCTGGCTCGG CATCGCCCCG
TTCGGCGGCC CCCGCCACAT CTTCCAGAAT ATGGGCGACG GCACCTACGC CCATTCGGGC
CTGCTCGCGA TCCGCGCCGC GATCGCCGCC AACGTCAACA TCACCTACAA GATCCTCTGC
AATTCCGCCG TCGCCATGAC CGGGGGCCAG CCGGTCGAGG GTTCGCCCGA CGCCGGCATC
ATCGCGCGGC AGACGCTGGC CGAAGGCGCG CGAAAGGTCG TGCTGGTCAG CGAGGACCCG
GATCGCTTCC CGGACATGCC GGCCGGGATC GAGGTCCATC ATCGCGACGC CCTGATGCGC
ATCCAGCGCG AGCTGCGCGA GATCGAGGGC GTCACCGTCC TCGTCTATGA CCAGGGCTGC
GCGGCGGAGC GGCGGCGGCT GCGCAAGCGG GGCGAATATC CGGACCTGCC GATCCGGACC
TTCATCAACA GCGACGTCTG CGAAGGCTGC GGCGACTGCA ACAGCAAGTC GAGCTGCGTC
AGCGTGTTGC CGCTCCAGAC CGAGCTGGGC GTGAAGCGCC AGATCGACCA GGAGAATTGC
AACAAGGATT ATACCTGCGT CGAGGGTTTC TGCCCGTCCT TCATCACCGT CACCGGCGGC
AAGCTGCGCA AGGCGGCCTC CAGCGCCGAC CTGCTGACGA CGCTGGGCGA GCGGCTGGTG
GAGCCCGCTC CCGCCGCGCT CAGCGCCGAT TCGTTCAACA TCGTGCTCGC GGGCATCGGC
GGCACCGGGG TCATCACCCT CGGCGCGACG CTGGCGCGCG CCGCCTGGCT GGAAGGCCAG
AAGGTGCTGA CCTTCGACGT GACCGGCGTG TCGCAGAAGA ACGGCGCTGT GTTCAGCCAT
ATCCGTTTCC TGGGCGACGG GTCCGAGGAG GATTTCCGTC CGCGCATCCC GCGCGAGCAG
CTCGACCTGC TGGTCGGCTG CGACGCGATC GCCGCGACCG CGCCCGAAGT CGTCCAGTTG
CTTTCGCCCG GCCGGACCCA GGCCGTCCTC AACGCGGACG TCATTCCCAC GGCGGTGTTC
CAGCGCGATC CCGGCTTCGA CATGTCGTTC CAGCGCTTCG GGCGCGTGGT CGGCGACGTG
CTCGACGATC GGGCCGTCCA TCGCGCGAGC CCTGGCCCGG TGGCGGCGCG CATCCTGGGG
ACGGGGCCGC TGCTCAACAT CTTCATGCTC GGCTTCGCGT TCCAGCGGGG CCTGCTCCCG
CTGCGGAGCG AAGCGATGGA GCGAGCCTTC TCGGAGGGGC GGAACGGCAA GGGCAACCTG
CTGGCCTTCC GCCTCGGCCG CATGGCCGCG CAGGACCCGG CGACGTTCGA CAAGCTGGTC
GGTGCCGAGG TGGCGCCCGT CCCGCTGACC GAGTTGCCGC TGGAAGCCGC CATCCAGCGC
TGCCGCGAGC TGCTGACCAG CTATCAGGAC AGGGCCTATG CCGATCGTTA CGAGCGGTTC
GTGCGCCGGG TCGCGGCCGG CGATCCGCGC GGCGATGTCG CGCGGGCCGT CGCGCTCAAC
CTGTTCAAGC TGATGCGCTA CAAGGACGAA TATGAGGTTG CCCGGCTCCA TGCCTCGCCC
GAGCTTCGCC AGCGGCTCGA CCGGATGTTC GAGGGGCCGT ACCGGCTATC CTTCAACCTC
GCCCCACCGA TCCTGCCGCT CGGTCGGACC GACGCCGGCG AGCCGCGCAA GCGGCGTTTC
GGCGGCTGGA TGATGTCGGC GTTCAGGTTG CTCCGCCACT TCAAATTCCT GCGCGGCACG
CCGTTCGATC CGTTCGCCTA TGGCGCCGAT CGCAAGCTGG AACGCCGGCT GATCGCCGAC
TATCGCGGCT GGATCGAGGA GCTGCTGCCG AGGCTCGACA GGGTCGACTA TGCCAGCGCG
GTCGCGATCG CGGCCCTGCC GGAGGACATC AGGGGCTACG GCCCCGTCAA GGAACGCAAT
GTCGAGGCGG CGCTGGCCCG TCGGCAGGAA CTGCTGGCGG CGCTCGATCG CGTGCCGGAG
GAGCAGGCGG CATGA
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| Protein sequence | MIVTANANSI EGEGEILSGT QALVRGMIAQ AEDDRARGWN TAGFVSGYRG SPFGNVDLEL
WQAQEALEAH SILFQPGLNE DMAATACWGT QQVPLMENPR YEGVFAFWYG KGPGVDRSGD
VFKHGNLAGT SAKGGVVLLA GDDHGAKSSS TAHQSEHMFV AASIPVFNPS SIEEYFEYLP
VAVSMSRFAG TWIGFKCATE IVEASAVLPL RRPERTLVLP EVEAPSGGYH IATQFAPLAQ
EESLYRYRLP AARAFLAANA LDRVTLDSPR RMLGIIAPGK AHVDVHEALR LLGLDGERAA
ALGIRILKPL VTWPLDPAAA RPFVAGHREV LVVEEKRSLV EWQLAQILLG IPDAQRPALS
GKTTPAGAPL LNEYGELTAT SVALALADRL EALDLLDAGL REARERIRAE AAQARGAGPV
ARAPMFCSGC PHNRSTRVPE GSEALGGIGC HGMAMWIPDL RTRPSTHMGG EGGTWLGIAP
FGGPRHIFQN MGDGTYAHSG LLAIRAAIAA NVNITYKILC NSAVAMTGGQ PVEGSPDAGI
IARQTLAEGA RKVVLVSEDP DRFPDMPAGI EVHHRDALMR IQRELREIEG VTVLVYDQGC
AAERRRLRKR GEYPDLPIRT FINSDVCEGC GDCNSKSSCV SVLPLQTELG VKRQIDQENC
NKDYTCVEGF CPSFITVTGG KLRKAASSAD LLTTLGERLV EPAPAALSAD SFNIVLAGIG
GTGVITLGAT LARAAWLEGQ KVLTFDVTGV SQKNGAVFSH IRFLGDGSEE DFRPRIPREQ
LDLLVGCDAI AATAPEVVQL LSPGRTQAVL NADVIPTAVF QRDPGFDMSF QRFGRVVGDV
LDDRAVHRAS PGPVAARILG TGPLLNIFML GFAFQRGLLP LRSEAMERAF SEGRNGKGNL
LAFRLGRMAA QDPATFDKLV GAEVAPVPLT ELPLEAAIQR CRELLTSYQD RAYADRYERF
VRRVAAGDPR GDVARAVALN LFKLMRYKDE YEVARLHASP ELRQRLDRMF EGPYRLSFNL
APPILPLGRT DAGEPRKRRF GGWMMSAFRL LRHFKFLRGT PFDPFAYGAD RKLERRLIAD
YRGWIEELLP RLDRVDYASA VAIAALPEDI RGYGPVKERN VEAALARRQE LLAALDRVPE
EQAA
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