Gene Swit_2021 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSwit_2021 
Symbol 
ID5199437 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSphingomonas wittichii RW1 
KingdomBacteria 
Replicon accessionNC_009511 
Strand
Start bp2262584 
End bp2263483 
Gene Length900 bp 
Protein Length299 aa 
Translation table11 
GC content70% 
IMG OID640581565 
Productenoyl-CoA hydratase 
Protein accessionYP_001262518 
Protein GI148554936 
COG category[I] Lipid transport and metabolism 
COG ID[COG1024] Enoyl-CoA hydratase/carnithine racemase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones41 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones13 
Fosmid unclonability p-value0.727479 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGCGACT TCGAGACCAT CAGGTTCGAT GTCGATCGGG GGATCGCGAC CATCACCCTG 
GCGCGCCCCG AGCGCATGAA CACGATGAAC GCGACGATGA CGCTGGAGCT GATACGCGCC
CTCGACACCG CCGACGCCGA TGACGATGTT CGGGTGGTGA TCGTCACCGG CGAAGGTGGC
CGGGCCTTCT GTGCGGGGGC GGACATTTCC GGCGGGGCCG AGACCTTCGA CTATTCGAGG
CGCGACGCCG CCGTGCGGGC CGAGGCCGAG CGCGGCGGGA CCTATCGCGA CAGCGGCGGA
CGGGTGGCGC TGCGCATCTT CAATGCGCTC AAGCCGGTGA TCGGCGCGAT CAACGGCGCG
GCGGTCGGGG CGGGCGCCAC CATATCGCTG GCGATGGACG TCCGTCTTGC GGCGGAACCG
GCCCGTTTCG GCTTCCCCTT CGTCCGGCGT GGCATCGTGC CGGAATCGGC GTCGAGCTGG
TTCCTGCCGC GCATCGTCGG CATCTCGACG GCGCTCGAAT GGACGCTGTC GGGCCGGCTG
GTCGGCGCGG CCGAGGCGAA GGAGCGGGGG CTCGTCCGCT CGGTCCATGC GCCCGACGAA
CTGCTGCCCG CCGCCCGCGC GCTGGCCGCC GAGATCGTCG AGAACGCCGC GCCGGTGTCG
GTCGCGCTGA CGCGGCAGAT GATGTGGCGG ATGCTCGGCA GCGACCATCC GATGGACGCG
CATCGGCTCG ACAGCCGGCT GGTGCAGGCG CTGGGCAGCT CGGCCGACGC ACGCGAAGGG
GTCGGCGCCT TCCTGGAAAA GCGCCCGGCG CGTTTCGAGG GCCGCGTCTC GGCGGACATG
CCGCCGGCCT TTCCATGGTG GACCGAACCC GAATTCCAGG ATCAGAAAAG CGAGAGGTAG
 
Protein sequence
MSDFETIRFD VDRGIATITL ARPERMNTMN ATMTLELIRA LDTADADDDV RVVIVTGEGG 
RAFCAGADIS GGAETFDYSR RDAAVRAEAE RGGTYRDSGG RVALRIFNAL KPVIGAINGA
AVGAGATISL AMDVRLAAEP ARFGFPFVRR GIVPESASSW FLPRIVGIST ALEWTLSGRL
VGAAEAKERG LVRSVHAPDE LLPAARALAA EIVENAAPVS VALTRQMMWR MLGSDHPMDA
HRLDSRLVQA LGSSADAREG VGAFLEKRPA RFEGRVSADM PPAFPWWTEP EFQDQKSER