| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Swit_2018 |
|---|
| Symbol | |
|---|
| ID | 5199434 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Sphingomonas wittichii RW1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009511 |
|---|
| Strand | + |
|---|
| Start bp | 2259115 |
|---|
| End bp | 2260311 |
|---|
| Gene Length | 1197 bp |
|---|
| Protein Length | 398 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 68% |
|---|
| IMG OID | 640581562 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_001262515 |
|---|
| Protein GI | 148554933 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 23 |
|---|
| Plasmid unclonability p-value | 0.135716 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 15 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGGATCTGG CGGGAAAGTT CTGGCGAGGC AGCGGCGTGG TCCGGTTCGG GTCGCAGGTG
GCCTGGGAAG GGCTGACGAG ATATTGCCCG ACCGATCCGG ACAAGGTGCC GGCCTCCGCC
GCCAGGATCT CGCCGCAATG GCTGAACGCC GTCCTGTGCC GCGACACGCC CGGCGCCGAG
ATCACCGAGA TCGACGTCAC CGGCGGCAGC GACGGCACCA ACACGCGGCG CGCGCTCCGC
GTCGGCTATA ACGAGGCGGG CATGGCCGCC GGGCTGCCGA CCGAGCTGTT CGTCAAGTCG
GCCACGGCGA TGCGGACGCG GATGATGAAC ACGCTCACCA CGCGCGGCGA GAGCGAGGTC
ATCTTCTACC AGTCGATGCG CCCGCGCCTG CCGATCGAGG CGCCGCGCGC CATCTATGCC
GGGTTCGACC GGTCGTCGGG CCGGATGCTG ATCATCTTCC CGAACATGGC GGCGGCCGGA
ACCAGGTTCC TCGACCCCTC CCACCATGTC ACGCGCGAGC AGGCGGAGGG GATGATCGAC
CTGCTCGCCG GCTACCAGTC GGCGACCTGG AACAGCCCGG AGCTGCGGTC GAGCCGCTCC
TTCCCGACGA CGCTCCGCTA CCAGGAACTG ATCAACGTCC GCGCGCTTCC CTTCGAGAAG
CGCGGCGCGG TCGGCCTCGA CAGGGCCGCC AGGGTGATGC CCGATGCGCT CAACCGGATC
GACCGGAACC GGCTGTGGCG CCTCCACATG GCGTCGATCA AGCGGCTGGA GAAGCGCGCC
CATGTGCTGA CCCATTACGA CATGCATGTC GGCAACTGGT ACATCACCGG CGACGGACGC
ATGGGCCTCA CCGACTGGAG CATGCGCTTC GGCCACTGGA GCGCGGACCT CACCTACATG
CTGCTCTCGG CGCTGCGCAT CGAGGACCGG CGGGCATGGG AACGCGACCT GCTGAAGCGC
TATCGCGAGC AGCTCGCCAG CGGCGGGGTG AAGGACGGCC TGCCCAGCGA CGACGAGGTC
TGGGCCGAAT ATCGCCGCCA GACCTTCCAC CCGCTCTATT TCTGGCTGAC GACGATCGGC
GCGGGGGTGC TGCAACCCGA CATGCAGCCG GACCATATCT CGCTCGCCAA TCTGGAACGC
ATGGGCCAGG CGATGGTCGA CCTGGATTCG TTCAGCGCGA TCGAAGAGGT GATGTAA
|
|---|
| Protein sequence | MDLAGKFWRG SGVVRFGSQV AWEGLTRYCP TDPDKVPASA ARISPQWLNA VLCRDTPGAE
ITEIDVTGGS DGTNTRRALR VGYNEAGMAA GLPTELFVKS ATAMRTRMMN TLTTRGESEV
IFYQSMRPRL PIEAPRAIYA GFDRSSGRML IIFPNMAAAG TRFLDPSHHV TREQAEGMID
LLAGYQSATW NSPELRSSRS FPTTLRYQEL INVRALPFEK RGAVGLDRAA RVMPDALNRI
DRNRLWRLHM ASIKRLEKRA HVLTHYDMHV GNWYITGDGR MGLTDWSMRF GHWSADLTYM
LLSALRIEDR RAWERDLLKR YREQLASGGV KDGLPSDDEV WAEYRRQTFH PLYFWLTTIG
AGVLQPDMQP DHISLANLER MGQAMVDLDS FSAIEEVM
|
|---|
| |