Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Swit_2017 |
Symbol | |
ID | 5199433 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Sphingomonas wittichii RW1 |
Kingdom | Bacteria |
Replicon accession | NC_009511 |
Strand | - |
Start bp | 2258114 |
End bp | 2258956 |
Gene Length | 843 bp |
Protein Length | 280 aa |
Translation table | 11 |
GC content | 70% |
IMG OID | 640581561 |
Product | protein tyrosine/serine phosphatase |
Protein accession | YP_001262514 |
Protein GI | 148554932 |
COG category | [T] Signal transduction mechanisms |
COG ID | [COG2365] Protein tyrosine/serine phosphatase |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 25 |
Plasmid unclonability p-value | 0.166797 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 17 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCCTGCCC GATCACCCGA CGCCGCCCCC GCGCGGCAAC GCCATGTCGT CTTGCCGGGC ACGTCGAACC TGCGCGATCT CGGCGGCTAT GCGGGTGCCG GCGGCCGCAA GGTCCGCTGG GGGCGGCTCT ATCGCTCGGG CGCGATGCCG AAGCTGGGGG CGGCGGACTG GGTGTGGATG CGGGCGCAGC GCATCGCGCT GGTCTGCGAC CTCCGCTCCG CGGCCGAGCG CGAGCTGGCG CCGACGCGCT GGCAGGGGCC GGAGCATAGC CGCCACATCT TGGCCGACTA TGATCCCGCC CTGATCTACG GAAGGCCCTT CGTCCCGGCT CGCCCCGGCG CGGCGGTCAA CGACCTGCAC CAGGGGCTCT ACGGCCTGTT CGTCGAGATC CTCGCCCCGA CCTTCGCGGA GCTGTTCGCG GCGCTGCTCG ACGGGGAGGC GCCGGTCATC TTCCATTGCT CGGCCGGCCA GGACCGGACC GGCCTGGCGG CGGGATTGCT GCTCGACCTG CTCGGGGTCG ATCGCGACAC CATCTATGCT GATTATCTGC TGTCCACCGA ATGCCGCCGC TTCGACAATG AGCTGGACCG GCTCGGCGTC GCGGCCTTCG CGGACACCAA CCTCGTTGCC CGCTTCTATA CCGACGCGAT CCGCCGCAAC GGCATGGATG CGATCAAGCC GCCGAAGCTG GTCGATGCGG AAGGGACGGC CCTGCTGAAG CACGGTTTCG ACGCGATCGA GGCGCAATTC GGCAGCGTCG AGCGCTATGC GGAGCAGCGG CTGAAGATGG ACGCCGGGGC GATCGGGCGG CTGCGCGCGC TGTATCTGGA ACCGGACGCC TGA
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Protein sequence | MPARSPDAAP ARQRHVVLPG TSNLRDLGGY AGAGGRKVRW GRLYRSGAMP KLGAADWVWM RAQRIALVCD LRSAAERELA PTRWQGPEHS RHILADYDPA LIYGRPFVPA RPGAAVNDLH QGLYGLFVEI LAPTFAELFA ALLDGEAPVI FHCSAGQDRT GLAAGLLLDL LGVDRDTIYA DYLLSTECRR FDNELDRLGV AAFADTNLVA RFYTDAIRRN GMDAIKPPKL VDAEGTALLK HGFDAIEAQF GSVERYAEQR LKMDAGAIGR LRALYLEPDA
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