Gene Swit_2015 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSwit_2015 
Symbol 
ID5198437 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSphingomonas wittichii RW1 
KingdomBacteria 
Replicon accessionNC_009511 
Strand
Start bp2256533 
End bp2256943 
Gene Length411 bp 
Protein Length136 aa 
Translation table11 
GC content71% 
IMG OID640581559 
Producthypothetical protein 
Protein accessionYP_001262512 
Protein GI148554930 
COG category[R] General function prediction only 
COG ID[COG1545] Predicted nucleic-acid-binding protein containing a Zn-ribbon 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones27 
Plasmid unclonability p-value0.196649 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones17 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCGGAAG CGAAAGGACC GGCCACGAAG CCCGTCTCCA ACCGGGACTT CGATTTCTTC 
TACCAGGGCC TCGCCGACGG CGCGCTGCTG GTGCAGCAAT GCGACGGGTG CGGGGCGCTG
CGCTGCCCGC CGGGGCCGAG CTGTCCCGAA TGCCGCTCCT TCGCATGGAC CGCCCTGCCG
CTGGGCGGCA CCGGACGGAT CTTCAGCTAC ACGGTCCATC ACCATCCGCC GCTCGCGGGC
TTCGCGACGC CGCTGCCCGT GGCGCTGGTG GAGATGGACG AAGCGATCCG GATGGTCGGG
CCGATGGACG ATACCGCGCC CGATCGGCTG CGGATCGGCG CGCGCATCGC GACCCGCTTC
GTGGAGCGCG ACGGCGTCGC CGGCTTCCGC TTCGTGCTGG CCGACGCATG A
 
Protein sequence
MAEAKGPATK PVSNRDFDFF YQGLADGALL VQQCDGCGAL RCPPGPSCPE CRSFAWTALP 
LGGTGRIFSY TVHHHPPLAG FATPLPVALV EMDEAIRMVG PMDDTAPDRL RIGARIATRF
VERDGVAGFR FVLADA