Gene Swit_2007 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSwit_2007 
Symbol 
ID5200153 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSphingomonas wittichii RW1 
KingdomBacteria 
Replicon accessionNC_009511 
Strand
Start bp2246709 
End bp2247827 
Gene Length1119 bp 
Protein Length372 aa 
Translation table11 
GC content71% 
IMG OID640581551 
ProductNADH:flavin oxidoreductase/NADH oxidase 
Protein accessionYP_001262504 
Protein GI148554922 
COG category[C] Energy production and conversion 
COG ID[COG1902] NADH:flavin oxidoreductases, Old Yellow Enzyme family 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones28 
Plasmid unclonability p-value0.582883 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones17 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTCGACCT GCCCTGACGC GCTGTTCTCG CCCTTCACCT GCAAGAGCCT GCGCGTGCCC 
AACCGCATCG TGATGGCGCC GATGACCCGT TCCTTCTCCC CGCGCGGCAT CCCGACGGAG
GAGGTGGCGG CCTATTACCG GCGGCGCGCC GAGGGCGGCG TCGGCCTGAT CATCGCCGAG
GGCGCGGCCA TCGACCGTCC CGGCGCGGTG GACGCGACCC ATATCCCCCA TTTCCACGGC
GAGGCGCCGC TGGCCGGCTG GCGGCGCGTG GCCGACGAGG TCAGGACGGC CGGCGCCAGC
ATCGCGCCGC AGCTCTGGCA CATCGGCGCG GCCCCCCGGC AGGCGCACCA TGTCGGCGAC
CTCACCGGCG AGGGGGAGAG CCCCTCGGGC CGTTTCTCCG CGACGGCGGA TCATGGCCGC
GCCATGTCCG ACGAGGATAT CGCCGACACG ATCGCGGCCT TCGCGCGCGC CTCCGCCGAC
GCGAAGCGGC TCGGCTTCGC CGCAACCCAG TTCCACGCGG CGCACGGCTA TCTGTTCGAC
CAGTTCTTCT GGGACGTCTG CAACTTCCGT AGCGACGCAT GGGGCGGTCC CGACCTCGCC
AGCCGCAGCC GCTTCGCGAT CGAGGCGGTG CGCGCGACCC GCGCGGCGGT GGGCGAGGAT
TTTCCCATCA TGCTGCGCAT CTCCCAGTGG AAGCAGCAGG ATTATGGCGT GAAGCTGGCG
GACGGCCCGG CGGAGCTCGA ACGCTGGCTC GGCCCGCTCG CCGACGCCGG GGTCGACATC
TTCGATTGCT CGCAGCGCCG CTTCTGGACG CCCGAGTTCG AAGGATCGGA CCTCAACCTC
GCCGGCTGGG TGAAGAAGAT GACGGGGAAG CCGACGATCA CCGTCGGCTC GGTCGGGCTG
GCGACCGAAT TCCTCAGCAC GCATCGCGAC CGCAGCGTCA TCAAGGCCGA CGTCGCCCGG
ATCGACGACC TGGTCCGGCG GCTCGATCGC GGCGACTTCG ACCTGGTCGG GGTCGGCCGC
GCGCTGCTCG CCGACCCCGA ATGGCCCGGC AAGCTCCGCG AGGGCCGGGC CGGCGAGATG
AAGGACTATT CGATCCTCGA TCGCGAACGG CTGCACTGA
 
Protein sequence
MSTCPDALFS PFTCKSLRVP NRIVMAPMTR SFSPRGIPTE EVAAYYRRRA EGGVGLIIAE 
GAAIDRPGAV DATHIPHFHG EAPLAGWRRV ADEVRTAGAS IAPQLWHIGA APRQAHHVGD
LTGEGESPSG RFSATADHGR AMSDEDIADT IAAFARASAD AKRLGFAATQ FHAAHGYLFD
QFFWDVCNFR SDAWGGPDLA SRSRFAIEAV RATRAAVGED FPIMLRISQW KQQDYGVKLA
DGPAELERWL GPLADAGVDI FDCSQRRFWT PEFEGSDLNL AGWVKKMTGK PTITVGSVGL
ATEFLSTHRD RSVIKADVAR IDDLVRRLDR GDFDLVGVGR ALLADPEWPG KLREGRAGEM
KDYSILDRER LH