Gene Swit_1999 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSwit_1999 
Symbol 
ID5196982 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSphingomonas wittichii RW1 
KingdomBacteria 
Replicon accessionNC_009511 
Strand
Start bp2239649 
End bp2240461 
Gene Length813 bp 
Protein Length270 aa 
Translation table11 
GC content73% 
IMG OID640581544 
Productenoyl-CoA hydratase/isomerase 
Protein accessionYP_001262497 
Protein GI148554915 
COG category[I] Lipid transport and metabolism 
COG ID[COG1024] Enoyl-CoA hydratase/carnithine racemase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones33 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones17 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGCGGCA ACGACAGCAA GCAGGAACCG GTCGCCCTGT TCGGCGTGGA GGACGGCCTC 
GCCCGCCTGA CGCTCCATCG GCCGGAAGCG CTCAACAGCC TCAGCTTCCG GCTGATCGAG
GAGATCATCG CGATCCTCGA CCGGGTCGAT GCCGATCCCG ATATCCGGGC CCTGCTCGTC
ACCGGCAGCG GCCGGGCCTT CTGCGCGGGC GCGGACCTGA CCGTCGCCGG CCCGTCCGGC
GATCCCTCCA GGCCCCGCGA CGTCGGCCAG GTGGTCGAGG ACTATTACAA CCCCCTCATC
ACGCGTCTCG CGACGCTGCG CCCGCCGATC GTGGTCGCGG TGAACGGCGC GGCGGTCGGC
GCCGGCGTCT CGCTCGCCCT GCAGGGCGAT ATCGTCGTCG CGGCCCGCAG CGCCTATTTC
CTGCAGGCGT TCACACGGGT CGGGCTCATC CCCGACGCCG GCGCGACCTG GCTGCTGCCG
CGCCTGGTCG GCATCGCGCG CGCCAAGGCG ATGATGCTCC TGGCCGACCG GATCCCCGCC
GAGGAAGCCG CCGCCATCGG CCTGATCCAC AGCGCGGTCG ACGACGACGC GCTGGCGGCC
CGCGCCGAGG AGATCGCCCG CCGCCTGGCC GATGGCCCAA CGGTCGCCTT CGGGCTGGTC
CGCCGTGCCG TGCGCGAAGG GCTCGGCGGC GACCTGGCCG CTTCGCTCCG GATCGAACGG
GAGGCCCAGC GCGAGGCCGG CTTCACCGCC GACTATGCCG AGGGCGTGCA GGCTTTCCGC
GAAAAGCGCC CGCCCCGCTT CACCGGCCGA TGA
 
Protein sequence
MSGNDSKQEP VALFGVEDGL ARLTLHRPEA LNSLSFRLIE EIIAILDRVD ADPDIRALLV 
TGSGRAFCAG ADLTVAGPSG DPSRPRDVGQ VVEDYYNPLI TRLATLRPPI VVAVNGAAVG
AGVSLALQGD IVVAARSAYF LQAFTRVGLI PDAGATWLLP RLVGIARAKA MMLLADRIPA
EEAAAIGLIH SAVDDDALAA RAEEIARRLA DGPTVAFGLV RRAVREGLGG DLAASLRIER
EAQREAGFTA DYAEGVQAFR EKRPPRFTGR