| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Swit_1988 |
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| Symbol | |
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| ID | 5196351 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Sphingomonas wittichii RW1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009511 |
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| Strand | - |
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| Start bp | 2227898 |
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| End bp | 2229310 |
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| Gene Length | 1413 bp |
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| Protein Length | 470 aa |
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| Translation table | 11 |
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| GC content | 64% |
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| IMG OID | 640581533 |
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| Product | Rieske (2Fe-2S) domain-containing protein |
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| Protein accession | YP_001262486 |
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| Protein GI | 148554904 |
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| COG category | [P] Inorganic ion transport and metabolism
[R] General function prediction only |
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| COG ID | [COG4638] Phenylpropionate dioxygenase and related ring-hydroxylating dioxygenases, large terminal subunit |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 36 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 21 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGTCTACC AATATTATCA TATCGATTTC GGCAAGCCGG AGCCCGGTTC GCGGATCGAG
GACGTGCCGA CCTATGACGA CGTGCTCAAG GCCGACGAAG CGCCCCTGCC GCCGCTGGCG
CAGGAAAAGG GCAACCATCA GCCCGCGCCG CGCCTGATCG GCTATGACCG CTATTATTCG
CGGGAGATCT TCGATCAGGA GATCGAGAAG ATCTGGAAGA AGTACTGGCA GTTGGCATGC
CGCGAGGAGG ATATCCCCAA TGTCGGCGAT CGCATCGCCT ATGACGTCGT CGGCATGTCC
TTCGTCGTCG TGCGATCGGG CCCCGACGAG TTCCGCGCCT TCCACAACAG TTGCCGCCAT
CGCGGCCGCA AGCTGTGCGA CAAGAAGGGC TCGGGCAGCC ATCTGCAATG CGCCTTCCAC
GGCTGGTCCT ACGGGCTGGA CGGCAAGCTC AACTGGATAC CGTTCGAGCA GGAATTCCCC
CATGTCGATC GGGCGCAGTA CAGCCTGCCC GAGGTGCGGA CCGCGCGCTG GGGCGGCAAC
GTCTTCATCA ATCCCGATGC CGATGCGCCG CCGTTCGAGA CCTTCCTGGG TCCGCTCGCG
CGCCACTGGG TCGATTGCCC GCAGGAGGAT CGCTACACCG CGCTCCACGT CCGCAAGAAG
GTCCGCTGCA ATTGGAAGGC CGCGCAGGAG GCGTTCAACG AGGCCTATCA CGTCGTCGAG
ACCCATGCCG ACGGCATGCC GATGTTCGGA TCGGCGCTGA CCCAGATCGA CTGCTGGGAA
GAGGACAATG CCCGCGTCAA CCGGCTGGTC ACGCCGGGCA TGGTCGTCGA TCCCTATATC
GCCGACCGGG TCAGCACCCA TGAGGGGCTG AAGGTGTTCT GCAGCGCCTA TGGCTTCGAC
CCGCCGCCGG AGGACCGGGG CCTCACCGCG CCGGACGCGC GCCATTATGC CGCCGAGCAG
ATCCGCAAGC GGCTGGAGGA GAGCACCGGC CGGGATTTCT CGGGCCACGC GCCGGCCTAT
TTCCTCGACA TGGCGAAGTA CGTCATGTTC CCGAACTTCC ACCCCTGGTG GGGCGAGATG
CTGCCCTGGT GGTACAGGTT CCTGCCCTAT GAGAATGATC CGGAATGCTC GACCATGGAG
ATCCGGGTGC TGATGCCGAT CCCCGCCAGC GGGGAGGTCC CGCCGCCGGT CGAGGTCGTC
GAGATCGATT TCGACGAGAA GGGGATGGAC TATCCCCAGC TCGGCCCGCT CGGCCACCTG
GTCGACCAGG ACATGTCGAA CATGGTCGCC GTGCAGAAGG GGTTCAAGGC CGCGGCGGCG
GGCAAGGACT ATCTGACGCT GGCGCCCCGC GCCGAGGCGC AGATCGGGCA TTTCCACGAA
GTCTATGACG AGGTGATGGG CTTCGGCGAT TGA
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| Protein sequence | MVYQYYHIDF GKPEPGSRIE DVPTYDDVLK ADEAPLPPLA QEKGNHQPAP RLIGYDRYYS
REIFDQEIEK IWKKYWQLAC REEDIPNVGD RIAYDVVGMS FVVVRSGPDE FRAFHNSCRH
RGRKLCDKKG SGSHLQCAFH GWSYGLDGKL NWIPFEQEFP HVDRAQYSLP EVRTARWGGN
VFINPDADAP PFETFLGPLA RHWVDCPQED RYTALHVRKK VRCNWKAAQE AFNEAYHVVE
THADGMPMFG SALTQIDCWE EDNARVNRLV TPGMVVDPYI ADRVSTHEGL KVFCSAYGFD
PPPEDRGLTA PDARHYAAEQ IRKRLEESTG RDFSGHAPAY FLDMAKYVMF PNFHPWWGEM
LPWWYRFLPY ENDPECSTME IRVLMPIPAS GEVPPPVEVV EIDFDEKGMD YPQLGPLGHL
VDQDMSNMVA VQKGFKAAAA GKDYLTLAPR AEAQIGHFHE VYDEVMGFGD
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