| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Swit_1986 |
|---|
| Symbol | |
|---|
| ID | 5196349 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Sphingomonas wittichii RW1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009511 |
|---|
| Strand | + |
|---|
| Start bp | 2226671 |
|---|
| End bp | 2227507 |
|---|
| Gene Length | 837 bp |
|---|
| Protein Length | 278 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 67% |
|---|
| IMG OID | 640581531 |
|---|
| Product | hydroxyacylglutathione hydrolase |
|---|
| Protein accession | YP_001262484 |
|---|
| Protein GI | 148554902 |
|---|
| COG category | [R] General function prediction only |
|---|
| COG ID | [COG0491] Zn-dependent hydrolases, including glyoxylases |
|---|
| TIGRFAM ID | [TIGR03413] hydroxyacylglutathione hydrolase |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 40 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 24 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | GTGCGCCGGT CAGGCAATTT TTGCGGCGCG TGCCGCGAGG ACATCGAAAG GAACCGCCAG
ATGCCCGGCT TGGAGATTCA TCAATTCCCC TGCCTCGACG ACAATTACGC CTATCTCGTC
CATGTCGAGG GAAGCGACGT CACCGCCGCG ATCGACACGC CCGACGCCGA TGCGATCATC
GCCGAGCTGG ACAAGCGCGG CTGGACGCTG ACGCACATCC TCAACACCCA TTGGCATCCG
GACCATGCCG GCGGAAATGC GGCGCTCAAG CAGCGCTATG GCGCCCTGGT GATCGCCCCC
GCCGATCCCG AAGGCCGCAT TGCCGACATC GACCGGACCG TGCGGGACAG CGACCGGCTG
GACCTCGGCG GCGCGGAGGT GAAGGTTCTG GGGGTGCCCG GGCACACCAC CGATCATGTC
GCCTTCTGGT TCCCCGAGAC AGGCGCCGCC TTCGTCGGCG ACACGCTGTT CGCGCTCGGC
TGCGGCCGGC TGTTCGAGGG AACGCCCGAA CAGATGTGGG AGTCGCTGGG CAAGCTGACC
GCGCTGCCCG CGGACACGAT GGTCTATTGC GCGCACGAAT ATACCGCGTC CAACGCCCGC
TTCGCGGTGA CGATCGAGCC GGGCAATGCC GAACTCGTCG AGCGGGTCGA CCACATCCGC
CGCCTGCGCG AGGCCGACAC GCCGACCGTG CCGACGACGA TCGGGCTCGA ACTGCGCACC
AATCCCTTCC TGCGCACCCG ATCGGCCGAG ATTCGCGACC GGCTGGAAAT GCCCGAGGAT
GAGGACGTGG CGGTGTTCGC CGAGGTGCGG GCGCGCAAGG ACAGCTTCAA GGGTTAG
|
|---|
| Protein sequence | MRRSGNFCGA CREDIERNRQ MPGLEIHQFP CLDDNYAYLV HVEGSDVTAA IDTPDADAII
AELDKRGWTL THILNTHWHP DHAGGNAALK QRYGALVIAP ADPEGRIADI DRTVRDSDRL
DLGGAEVKVL GVPGHTTDHV AFWFPETGAA FVGDTLFALG CGRLFEGTPE QMWESLGKLT
ALPADTMVYC AHEYTASNAR FAVTIEPGNA ELVERVDHIR RLREADTPTV PTTIGLELRT
NPFLRTRSAE IRDRLEMPED EDVAVFAEVR ARKDSFKG
|
|---|
| |