| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Swit_1985 |
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| Symbol | |
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| ID | 5197196 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Sphingomonas wittichii RW1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009511 |
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| Strand | - |
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| Start bp | 2224120 |
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| End bp | 2226384 |
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| Gene Length | 2265 bp |
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| Protein Length | 754 aa |
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| Translation table | 11 |
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| GC content | 66% |
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| IMG OID | 640581530 |
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| Product | TonB-dependent receptor, plug |
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| Protein accession | YP_001262483 |
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| Protein GI | 148554901 |
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| COG category | [P] Inorganic ion transport and metabolism |
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| COG ID | [COG1629] Outer membrane receptor proteins, mostly Fe transport |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 29 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 20 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGATGCGAA ATCGCACTTC TATCCTGCTG GCTCTGCTCG GGACCTCGGT CCTCGCGGCG
CCTGCTCTCG CCCAGGGCGC CGCCGCGCCG GCCGCCGATG CCGCCGAGGA GGCTCAGGGC
CTTTCCGATA TCGTCGTGAC CGCCCGTCGC CGCACCGAGC CGCTGCAGGC GACCCCGCTC
GCCGTGTCGG CGCTCGACAG CCGGCGGCTG GAGGAGGCGC GCGTCTCCAA CATCACCGAT
CTGACCAACC TCACGCCGTC GATCACGCTG GCGCGCAACA CGACCAATCC GACCTCGCTG
TTCCCGTGGA TTCGCGGTTT CGGCACCAAG TCGACCGATC CGGCCGCGGA GCCGCCGATC
GCGATCACGA TCGACGGCAT CTATCAGGCA CAGCTGGTCG GCGCCTTCGT CAACCTGTTC
GACGTGGAGG CGATCGAAGT GCTGCGCGGT CCGCAGGGCA CGCTGCTCGG CAAGAACGCC
CCCGCCGGCG GCCTTTCGAT CCGTACCCGC CGGCCCGGCG AGGAGTTCGC GGCCAAGGGC
CAGATCGAAT ATGGCAGCTT CAAGAACCTG CACGCCAGCG GCTGGGTCGA CGTGCCGCTG
GTTCCGGGCG CGCTGTTCGG CACCGTCTCG GCGAACTACC AGCATTCGAA CGGCTATCAG
AAGAACATCG TGACCGGCCA GACGCTGGGC GGGATCAACA CCTCCTCGTT CCGCGCCGGC
CTGCTCGCCA AGCTGGGCGA CAGCACGACC TGGTACGTCA CCGCCCAATA TGACCAGGAC
AAGGGCGAGG ATGCCGGTGA TCGCAACATC AGCACCACCG ACCCGCTGGT CGTGCCCGGC
CTGACCTATG TCGTGCCGCC GTCCGCTTCG CTGACCTGCA CCAATGCCTA TAGCCGCGCG
CTGTGCGCCA ACGGCACCTT GCCGAACAAC CGTCGCTACA CCACCCAGGC GCTGCCCGGG
CCGGATCGCG ACAGCCATAA TTTCAGCGTG GCATCGAACC TCGACGTCGA TACCGGCCCG
GTCGCCCTGG CCCTCGTCAC CGGCTATCGC CAGTTCCGCG AGCTGGCTTT CTCGGACATC
GATGGCACCC AGCTCGGGAT CATCGACTCC CGCTACGACG GCAACTACCG CGCCTTCTCC
CAGGAGTTCC GCGTCGCGTC GAGCGACGGC GGCGGCCTCG ACATGGGCGG CCGGCTCCGC
TGGCTCGTCG GTTCCTATTA CTTCAACTAC GACTATGACC GCTTCAACCG GTCGACCACG
CTCGGCGCGC CGTCGACGAC CTATCAGGAG GGCGAGACCA AGAGCTACGC GCTGTTCGCC
CATGCCGAGT TCGACATCCT GTCGAACCTC AACCTGTCGG GCGGCATCCG CCAGACCTGG
GATCGCAAGA CCCACCTGTC GCGCGCCCAG CGCTTCTTCT CGGGGATCGA TCCCGAATTC
TCCCAGCGTC ATGCCTGGGA CAACATCTCC TACGACGTGA CGCTGAACTA CAACATCACG
CCCAACAACA TGATCTATGT GCGCCGCGCC ACCGGCTATC GCGGCGGCGG CTTCACCGGC
GTTCCCGCCA CCGCTCTGGC GGTGTCGACG GCCGATCCGG AGACGGTGGG CGCCTGGGAG
TTCGGTTCGA AGAACGACTT CTTCAACCAT CGCCTGCGCA TCAACCTGTC GGTGTTCCGC
AACAAGTTCC AGGACCTGCA GCGCGTCATC ACCGTCCCGG TCGACGTCGC CCCCTTCTTC
GTGCAGCGCC TGCTCAACGT TGCGAGCGGC ATAACCCAGG GTGCGGAGGT CGAGCTGCAG
GCCCGTCCGG TGAGCGGGCT GACCCTGCGC GCCAACCTCG GCTATCTCGA CGCGAAATAC
ACGCAGTTCA ACGCGAACGT CACCGGCAAC CTCGCCAACG GCAATGCCGA TCTCACCTTC
CTGCGCTTCC CCTATACGTC CAAGTGGACG GCGCAGTTCG GCGCGACCTA CGAGGCCGAT
CTCGGTTCGA GCGGCAAGCT GGTCTTCTCG GCCGACTACA ACTACCGCTC GCGCTACAAC
GTGACCGACC TGAACTATGC CTTCGGCGAG CAGAAGGGCT TCGGCCTGCT GTCGGGCACG
ATCACCTGGC GCGATGCCGA CGACCGCTAT TCGGTCTCGG TGTTCGGCCG GAACCTGACC
GACAAATTCT ACATCGACGG CGGCGACGCG GTCGGCGGCC TGACCACCTA TGTCTCGGAC
GGCCCGCCGC GCGAATGGGG CGTCTCGGTC GGCTTCAACT TCTGA
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| Protein sequence | MMRNRTSILL ALLGTSVLAA PALAQGAAAP AADAAEEAQG LSDIVVTARR RTEPLQATPL
AVSALDSRRL EEARVSNITD LTNLTPSITL ARNTTNPTSL FPWIRGFGTK STDPAAEPPI
AITIDGIYQA QLVGAFVNLF DVEAIEVLRG PQGTLLGKNA PAGGLSIRTR RPGEEFAAKG
QIEYGSFKNL HASGWVDVPL VPGALFGTVS ANYQHSNGYQ KNIVTGQTLG GINTSSFRAG
LLAKLGDSTT WYVTAQYDQD KGEDAGDRNI STTDPLVVPG LTYVVPPSAS LTCTNAYSRA
LCANGTLPNN RRYTTQALPG PDRDSHNFSV ASNLDVDTGP VALALVTGYR QFRELAFSDI
DGTQLGIIDS RYDGNYRAFS QEFRVASSDG GGLDMGGRLR WLVGSYYFNY DYDRFNRSTT
LGAPSTTYQE GETKSYALFA HAEFDILSNL NLSGGIRQTW DRKTHLSRAQ RFFSGIDPEF
SQRHAWDNIS YDVTLNYNIT PNNMIYVRRA TGYRGGGFTG VPATALAVST ADPETVGAWE
FGSKNDFFNH RLRINLSVFR NKFQDLQRVI TVPVDVAPFF VQRLLNVASG ITQGAEVELQ
ARPVSGLTLR ANLGYLDAKY TQFNANVTGN LANGNADLTF LRFPYTSKWT AQFGATYEAD
LGSSGKLVFS ADYNYRSRYN VTDLNYAFGE QKGFGLLSGT ITWRDADDRY SVSVFGRNLT
DKFYIDGGDA VGGLTTYVSD GPPREWGVSV GFNF
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