| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Swit_1981 |
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| Symbol | |
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| ID | 5197192 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Sphingomonas wittichii RW1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009511 |
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| Strand | - |
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| Start bp | 2219321 |
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| End bp | 2220061 |
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| Gene Length | 741 bp |
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| Protein Length | 246 aa |
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| Translation table | 11 |
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| GC content | 69% |
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| IMG OID | 640581526 |
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| Product | short-chain dehydrogenase/reductase SDR |
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| Protein accession | YP_001262479 |
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| Protein GI | 148554897 |
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| COG category | [I] Lipid transport and metabolism
[Q] Secondary metabolites biosynthesis, transport and catabolism
[R] General function prediction only |
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| COG ID | [COG1028] Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 37 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 20 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCGGGTCA AGGGCAAGGT CACGATCATC ACGGGCGCGG CGTCGGGCAT GGGGGCGTCC
CATGCCCGCC TGTTCGCCCG CGAAGGCGCG CGCGTCGTGG TCGCCGACAT ATTGGAGGCG
GAAGGGCGCG CGGTCGTCGA GGATATCGTC GCCCGGGGCG GCGAGGCGGT GTTCGAGCGT
CTCGATATTT CGAGCGAGGC GGACTGGGAT CGGGTGATGG ACGCCGCGAC GGCCCGGTTC
GGGCCGCTCG ACATCCTCGT CAACAATGCG GGCCTCACCG GTTCGGGCGT CCAGGAGGTC
GACGAGATCG CCCTGTTCGA CCGGCTGATC GCCACCAATC TCCGTGGGCC GTTCCTCGGC
GTTCGCGCGG CGGTGCGGCG CATGGAGGGC AGGGGCGGCG CGATCGTCAA CGTCGCCTCG
ATCTCCGCCA ATATCGGCAA TCCCGGCGTG CACATCGGCT ACAACGCGTC CAAGGGCGGG
GTGAGGACGC TGACCCGGGC CGCCGCCGCC GAATATGGGC CCCGCAAGAT CCGGGTGAAC
AGCGTCAATC CGGGTGTGCT CCCGCCGATG ATCGGTTCGA AGCGCGTCGA CGTGGCCGAA
GGCCTGCTGG CGAGGGTGCC GCTCAACCGC ACCGGACAGG TGGAGGAGGT GTCGAACGCC
GTGCTGTTCC TGGCCTCCGA CGAGGCGTCC TACATCAACG GCGTCGAGCT CGACGTCGAC
GGCGGCCTGG TCGTCACCTG A
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| Protein sequence | MRVKGKVTII TGAASGMGAS HARLFAREGA RVVVADILEA EGRAVVEDIV ARGGEAVFER
LDISSEADWD RVMDAATARF GPLDILVNNA GLTGSGVQEV DEIALFDRLI ATNLRGPFLG
VRAAVRRMEG RGGAIVNVAS ISANIGNPGV HIGYNASKGG VRTLTRAAAA EYGPRKIRVN
SVNPGVLPPM IGSKRVDVAE GLLARVPLNR TGQVEEVSNA VLFLASDEAS YINGVELDVD
GGLVVT
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