Gene Swit_1980 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSwit_1980 
Symbol 
ID5199614 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSphingomonas wittichii RW1 
KingdomBacteria 
Replicon accessionNC_009511 
Strand
Start bp2218222 
End bp2219304 
Gene Length1083 bp 
Protein Length360 aa 
Translation table11 
GC content68% 
IMG OID640581525 
Productalcohol dehydrogenase 
Protein accessionYP_001262478 
Protein GI148554896 
COG category[C] Energy production and conversion 
COG ID[COG1062] Zn-dependent alcohol dehydrogenases, class III 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones32 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones20 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
TTGCGTGCTG CCGTGCTGAG GGAATTTCGC AGCGATCTGA TCATCGAGGA TGTCGAGATC 
GACACGCCGC GCACCGACGA AGTGCTGATC CGCACCGTCG CCTCCGGCCT CTGCCACACC
GACCTCACCT ATTGGGGCGG CCGGCATCCC CATCCGCTGC CGATGATCCT GGGGCATGAG
GGCTGCGGCA TCGTCGAGGC GATCGGCCCC GGCGTCACCA ACGTCGCGGT CGGCGACGCC
GTCGTCACCT GCATGACCAG CTTCTGCGGC CATTGCGACC ATTGCGTCAC CGGCAACCTG
GTCCTTTGCG AAAGCGCGGA GCGCGACCGC GCGCCGGACG CACCGCCGAA GATCACCGCC
CGGGGCGAGA GGGTGCATCC CTATGGCCGG CTCGGCACCT TCGCGGAGAA GATGCTGATC
TACAAGAACA GCTGCGTCCG CATCCGGCCG GACGTGCCGC TGGAGAAAGC CTCGGTGGTC
GGCTGCGGCG TGCTGACGGG CGTCGGCGCG GTGATCAACA CCGCCAAGGT GCAGCCGGGC
CAGTCGGTCG CCGTGCTCGG TTGCGGCGGC GTCGGTCTCT CGGCGATCAA CGGCGCGGCG
ATCGCCGGCG CCGGCCGCAT CATCGCGGTC GACACCCAGC AGGAGAAGCT GGAGCTTTCC
CGCGCGTTCG GCGCGACCGA CACCGTGGAC GCGAGCAGCG GCGACGCCGC CCGGCAGGTC
GTCGAGATGA CGCGCGGCGG GGTCGACGTG GCGTTCGAGG CGGTGGGCAC GCCGCAAACC
GCCCAGGCCG CCTTCGGCAT GATCCGCCGG GGCGGCGCGA TGATCCTCGT CGGCATGCTG
CCGCCCGACG AGACCGTGTC CTTTCCCGGC AAGGAGTTCG TCTACGGCAA GAAGGTCATC
GGCAGCATGC TGGGATCGAA CCGCTTTCCC CACGACATCC CGAAGCTCAT CGACTTCTAT
ATGCAGGGCA AGCTCAAGCT CGACGAACTC GTCTCCCAGC GCATCGCGCT GGACGAGGTG
AACGCGGCGC TCCAGCAGGT CGGCAAGGGC GGGGTCGCGC GCTCGGTCAT CATCTTCGAA
TGA
 
Protein sequence
MRAAVLREFR SDLIIEDVEI DTPRTDEVLI RTVASGLCHT DLTYWGGRHP HPLPMILGHE 
GCGIVEAIGP GVTNVAVGDA VVTCMTSFCG HCDHCVTGNL VLCESAERDR APDAPPKITA
RGERVHPYGR LGTFAEKMLI YKNSCVRIRP DVPLEKASVV GCGVLTGVGA VINTAKVQPG
QSVAVLGCGG VGLSAINGAA IAGAGRIIAV DTQQEKLELS RAFGATDTVD ASSGDAARQV
VEMTRGGVDV AFEAVGTPQT AQAAFGMIRR GGAMILVGML PPDETVSFPG KEFVYGKKVI
GSMLGSNRFP HDIPKLIDFY MQGKLKLDEL VSQRIALDEV NAALQQVGKG GVARSVIIFE