| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Swit_1974 |
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| Symbol | |
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| ID | 5197180 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Sphingomonas wittichii RW1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009511 |
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| Strand | + |
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| Start bp | 2211148 |
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| End bp | 2212239 |
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| Gene Length | 1092 bp |
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| Protein Length | 363 aa |
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| Translation table | 11 |
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| GC content | 69% |
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| IMG OID | 640581519 |
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| Product | L-carnitine dehydratase/bile acid-inducible protein F |
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| Protein accession | YP_001262472 |
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| Protein GI | 148554890 |
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| COG category | [C] Energy production and conversion |
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| COG ID | [COG1804] Predicted acyl-CoA transferases/carnitine dehydratase |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 42 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 20 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAGCGGCC CCCTCCACGG CATCAGGATC GTCGAGATTT CGGCGGTCGG CCCCGTCGCC
CTGTTCGCCA CGATCATGGC GGACCTCGGC GCCACCGTGA TCCGCGTCGA TCGCCCGTCG
CATTTCGAGG GCCGGAAGGA AGGCGCGCAC GTCGCCAACC GCCCGGTGGT CGACCGCGAC
CTCAAGCAGC CGGAAAGCGT GGCCTTCGTG CTCGATCTGG TGCGCGGCGC CGACGTGCTG
ATCGAAGGCT ATCGTCCCGG CGTGATGGAA CGGCTGGGCC TCGGCCCGGA CGTCTGCCTC
GCGGCCAACC CGAAGCTGGT CTTCGCGCGC ATGACCGGAT GGGGCCAGCA AGGGCCGTTC
GCCGGCGAGC CGGGGCATGA CATCAACTAT CTCGCGCTCA CCGGCGCGCT GGCGGCGATC
GGCACGGAGC AGGAGCCGAT CCCGCCGCTC AACCTGATCG CCGACTATGG CGGCGGTTCG
ATGTTCGCCT GCGTCGGGGT GCTGGCCGCC CTGCTGTCGG CGCTTCGCAG CGGGAAGGGA
CAGGTCATCG ACGTCGCCAT GATCGACGGC GTCGGTTCCC TCTTCTCGAT GCAATATGAG
CGTTATGCGC AGGGGCTCTG GAACAACGCC CGGCGCACCA ACACGCTGGA CGGCGCCGCC
CCCTATTATG GCTGCTACCC CTGCAAGGAC GGCAAATGGG TGGCGGCCGG CGCGCTGGAG
ATGAAGTTCC GCAGGGCGAT GGCGAACACC ATCGGCGTCC CCGAGCTGGG CGAGGAAAGC
TCCAGCGATC CGGCCAGCTG GCCGCAGCTG AGGACCAGGG TCGCCGAGGC CTTCAAGACG
GCGACGCGCG ACGAATGGAT GGAGCGGATG TACGGCCGCG AAACATGCTG CACGCCGATC
CTGGACATGG ATGAAGCGCC GCACCACCCG CACAATGTCG CGCGGACGGG CTTCTTCCAG
GACCAGGGAG GCTGGGTCCC CTCCCCCGCC CCGCGCTTCT CGGCGACACC CGCGGAGAGG
AAGGCGCCGC GCACGGCCGA GGACGTGCTG AAGGATTTCG CCGCGGCGGC GGGCACCGCT
CCCCCGGCCT GA
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| Protein sequence | MSGPLHGIRI VEISAVGPVA LFATIMADLG ATVIRVDRPS HFEGRKEGAH VANRPVVDRD
LKQPESVAFV LDLVRGADVL IEGYRPGVME RLGLGPDVCL AANPKLVFAR MTGWGQQGPF
AGEPGHDINY LALTGALAAI GTEQEPIPPL NLIADYGGGS MFACVGVLAA LLSALRSGKG
QVIDVAMIDG VGSLFSMQYE RYAQGLWNNA RRTNTLDGAA PYYGCYPCKD GKWVAAGALE
MKFRRAMANT IGVPELGEES SSDPASWPQL RTRVAEAFKT ATRDEWMERM YGRETCCTPI
LDMDEAPHHP HNVARTGFFQ DQGGWVPSPA PRFSATPAER KAPRTAEDVL KDFAAAAGTA
PPA
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