Gene Swit_1973 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSwit_1973 
Symbol 
ID5197179 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSphingomonas wittichii RW1 
KingdomBacteria 
Replicon accessionNC_009511 
Strand
Start bp2210417 
End bp2211151 
Gene Length735 bp 
Protein Length244 aa 
Translation table11 
GC content66% 
IMG OID640581518 
Productnitroreductase 
Protein accessionYP_001262471 
Protein GI148554889 
COG category[C] Energy production and conversion 
COG ID[COG0778] Nitroreductase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones44 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones21 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
TTGACCAAGA GTCTCGAGAA GAATCACTTC ACGGTTCGGC CTGACGACGA GCCGAACGAC 
GCCCATGTCT TTGCCCAGAT CTTGGGACGG CGGTTCAGTT GCCGCGGCTT CCTGCCCGAT
CCGGTGCCCG AGAAGACGAT CGCATCGATA TTGAGCATCG CGCAGCTCAC CGCGTCCTGG
TGCAACTCGC AGGCCTGGCA TCTCTACATC ACCAGCGGCG ACGCGACGCG GCGCTTCAGC
GAGGCGCTGA TGACCGCCGC CACCGCGCCC GGCGGATCGT CGCTGGAAAC GGATTTCCCG
CGCCCCGCCC AATATACCGG CCGCTATCAG GAGCGCCGCC GGGAAACCGG GTGGCAGCTT
TACGAGGCGG TGGGCATCGC CCATGGCGAC CGCGAGGCGT CCGGCCGCCA GACGCTGGAG
AATTTCCGGC TTTTCGGCGC GCCGCACGCC GCCGTGATCA CCTCCGACCG CGACCTCGGC
GTCTATGGCG CCGTCGATTG CGGCAGCTAT GTCGCCAATT TCATGACCGC AGCCCAGTGC
TTCGGCGTCG ACACGATCGC GCAGGCGGCC ATCGCCATGC AGTCGCAGGC CGTGCGCGAG
TTCTTCTCCA TCCCCGACGA TCGCCGGATC GTGTGCGGCA TATCCTTCGG CTATGGCGAC
AGGAAGCACC CCGCCAACGG CTTCCGCACG CGCCGCGACG GCATCGACGA AATCGCCACC
TGGGTGTCGA AATGA
 
Protein sequence
MTKSLEKNHF TVRPDDEPND AHVFAQILGR RFSCRGFLPD PVPEKTIASI LSIAQLTASW 
CNSQAWHLYI TSGDATRRFS EALMTAATAP GGSSLETDFP RPAQYTGRYQ ERRRETGWQL
YEAVGIAHGD REASGRQTLE NFRLFGAPHA AVITSDRDLG VYGAVDCGSY VANFMTAAQC
FGVDTIAQAA IAMQSQAVRE FFSIPDDRRI VCGISFGYGD RKHPANGFRT RRDGIDEIAT
WVSK