Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Swit_1973 |
Symbol | |
ID | 5197179 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Sphingomonas wittichii RW1 |
Kingdom | Bacteria |
Replicon accession | NC_009511 |
Strand | + |
Start bp | 2210417 |
End bp | 2211151 |
Gene Length | 735 bp |
Protein Length | 244 aa |
Translation table | 11 |
GC content | 66% |
IMG OID | 640581518 |
Product | nitroreductase |
Protein accession | YP_001262471 |
Protein GI | 148554889 |
COG category | [C] Energy production and conversion |
COG ID | [COG0778] Nitroreductase |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 44 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 21 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | TTGACCAAGA GTCTCGAGAA GAATCACTTC ACGGTTCGGC CTGACGACGA GCCGAACGAC GCCCATGTCT TTGCCCAGAT CTTGGGACGG CGGTTCAGTT GCCGCGGCTT CCTGCCCGAT CCGGTGCCCG AGAAGACGAT CGCATCGATA TTGAGCATCG CGCAGCTCAC CGCGTCCTGG TGCAACTCGC AGGCCTGGCA TCTCTACATC ACCAGCGGCG ACGCGACGCG GCGCTTCAGC GAGGCGCTGA TGACCGCCGC CACCGCGCCC GGCGGATCGT CGCTGGAAAC GGATTTCCCG CGCCCCGCCC AATATACCGG CCGCTATCAG GAGCGCCGCC GGGAAACCGG GTGGCAGCTT TACGAGGCGG TGGGCATCGC CCATGGCGAC CGCGAGGCGT CCGGCCGCCA GACGCTGGAG AATTTCCGGC TTTTCGGCGC GCCGCACGCC GCCGTGATCA CCTCCGACCG CGACCTCGGC GTCTATGGCG CCGTCGATTG CGGCAGCTAT GTCGCCAATT TCATGACCGC AGCCCAGTGC TTCGGCGTCG ACACGATCGC GCAGGCGGCC ATCGCCATGC AGTCGCAGGC CGTGCGCGAG TTCTTCTCCA TCCCCGACGA TCGCCGGATC GTGTGCGGCA TATCCTTCGG CTATGGCGAC AGGAAGCACC CCGCCAACGG CTTCCGCACG CGCCGCGACG GCATCGACGA AATCGCCACC TGGGTGTCGA AATGA
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Protein sequence | MTKSLEKNHF TVRPDDEPND AHVFAQILGR RFSCRGFLPD PVPEKTIASI LSIAQLTASW CNSQAWHLYI TSGDATRRFS EALMTAATAP GGSSLETDFP RPAQYTGRYQ ERRRETGWQL YEAVGIAHGD REASGRQTLE NFRLFGAPHA AVITSDRDLG VYGAVDCGSY VANFMTAAQC FGVDTIAQAA IAMQSQAVRE FFSIPDDRRI VCGISFGYGD RKHPANGFRT RRDGIDEIAT WVSK
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