| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Swit_1970 |
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| Symbol | |
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| ID | 5197576 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Sphingomonas wittichii RW1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009511 |
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| Strand | + |
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| Start bp | 2207494 |
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| End bp | 2208786 |
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| Gene Length | 1293 bp |
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| Protein Length | 430 aa |
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| Translation table | 11 |
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| GC content | 68% |
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| IMG OID | 640581515 |
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| Product | L-carnitine dehydratase/bile acid-inducible protein F |
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| Protein accession | YP_001262468 |
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| Protein GI | 148554886 |
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| COG category | [C] Energy production and conversion |
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| COG ID | [COG1804] Predicted acyl-CoA transferases/carnitine dehydratase |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 45 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 21 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCCCCAGC GGCCAGAAAT CCCCCCTTAT CAGCCGTCGC CCTCGCCCCA GCCGAAGGCG
CTCGCCGACG TTCGCATCGT CGATTTCTCC CGCGTGCTGG CCGGCCCGTT CGCCACGCAG
ATCCTCGGCG ATCTCGGCGC GGAGATCATC AAGATCGAGC AGATCGTGAC GGGCGACGAC
ACGCGCAGCC TGCTGCCCGA GCCCAGCCTC GGCGGCGAAA GCTTCTTCTA CCTCGCGCTC
AACCGCAACA AGCGCAGCAT CTCGCTCGAC CTGCGGACCG AGGAGGGCCG CAAGATCGCG
CTCGACCTGA TCGCCACCGC CGACGTCGTG CTGGAGAATT TCACGACGCG CGTCATGGAG
CAGTTCGGCC TCGACTACGC GTCGCTCAAG GACCGTTTCC CGCAGCTGAT CTATTGCTCG
GTCTCCGCCT ATGGCCGCAC CGGCCGGCTG GCCAACGCGG CCGGCTATGA TTCCGCCATC
TCGATGGAGA CCGGGGTTTC GGCGCTGAAC GTGACGGAGG GCGAATCCCC GGTGCCCGGC
GGCGTGCCCT TCGTCGACAT CACCACGGCG ATGAACGCCA CGATCGGCAT CCTCGCGGCC
CTGCATGCGC GCAAGCTCCA CGGCCGGGGC CAGTTCATCG AATCCGCGAT GTACGACTCG
GCGATCGCCG ACCTGTCCTA CAAGGGCTAT CAGTTCCTGG CGTCCGGCGT CAGCCCCGTC
TCGCTCGGCC GCAAGCCGAA ATTCGGCGTG CCGGGCGGGC AGTTCAACTG CAGCGACGGC
ATGGTCTGGT TCACCTGCAC CGGCCAGAAG ATGTTCCGCA ACTTCTGCGA CCTGGTCGTC
GAGAGGCCGG AGCTGTTCGA CGATCCGCGC TTCGACAGCG TCGCGAACCG CAACGCCAAT
TTCGAGGTGC TCTTCAATCT CCTGTCGGAG ATCTTCGCCA CGCAGGACCG GGCCTATTGG
TCCGATCGGC TGAAGCGCGC CGGCGTCCCC TGCGGCGAGG TGCGCAGCGT CGGCGAGGCG
CTGATGGCGC GCGAGACCGC CGAGCGCGAC ATGATCGCCG AGATCCCGCA CCCCACGGCG
GGGCGGATTC CGATGATCAA GTCGCCGATC AAGATGAGCC TGACCCCCGC CATCGATCCG
ACCCCGCCGC CGCTGCTCGG CCAGAACAGC CGCGAGATCC TGCGCGAGCT GCTCGGCTAC
AGCGACGAGC GGATCGACGC GCTGGCGTCG CAGGGCGTGA TCCAGGTCCT CGACGACGTG
CCCGCGCCGC TGGCATCGGA CGCGGCTGCG TGA
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| Protein sequence | MPQRPEIPPY QPSPSPQPKA LADVRIVDFS RVLAGPFATQ ILGDLGAEII KIEQIVTGDD
TRSLLPEPSL GGESFFYLAL NRNKRSISLD LRTEEGRKIA LDLIATADVV LENFTTRVME
QFGLDYASLK DRFPQLIYCS VSAYGRTGRL ANAAGYDSAI SMETGVSALN VTEGESPVPG
GVPFVDITTA MNATIGILAA LHARKLHGRG QFIESAMYDS AIADLSYKGY QFLASGVSPV
SLGRKPKFGV PGGQFNCSDG MVWFTCTGQK MFRNFCDLVV ERPELFDDPR FDSVANRNAN
FEVLFNLLSE IFATQDRAYW SDRLKRAGVP CGEVRSVGEA LMARETAERD MIAEIPHPTA
GRIPMIKSPI KMSLTPAIDP TPPPLLGQNS REILRELLGY SDERIDALAS QGVIQVLDDV
PAPLASDAAA
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