Gene Swit_1958 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSwit_1958 
Symbol 
ID5200233 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSphingomonas wittichii RW1 
KingdomBacteria 
Replicon accessionNC_009511 
Strand
Start bp2194408 
End bp2194785 
Gene Length378 bp 
Protein Length125 aa 
Translation table11 
GC content71% 
IMG OID640581503 
Producthypothetical protein 
Protein accessionYP_001262456 
Protein GI148554874 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones31 
Plasmid unclonability p-value0.432295 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones19 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCCACCG CCCTTCCCGA CCGCGCCGCC GACCAGGGCC GGGTGCTGTC CGAAGCGATC 
GCGCGGGTCG CTGGCTGCTG GAAGCTGACC AACGAGCAGT TGGGCGCGAT CCTGGGCCTG
TCGCCGGCGA CCGCCTCGCG GCTGCGCTCG GGCGGCTTCC GGCTCGACCG GTCGAGCAAG
GCGTTCGAGC TCGGCCAATA TCTGGTCCGC CTGTTCCGCA GCCTCGACGC GCTGATGGGC
AGCGACGACC TGGCGTCGAT CTCCTGGCTC AGGACCGCGA ACCTCGACCT CGACGGCCGC
CCGATCGACC TGATCCGGAC GGTGCGCGGG CTGAACGACG TGGCGGACTA TGTCGACGAC
CATCGCGCCC AGATCTGA
 
Protein sequence
MATALPDRAA DQGRVLSEAI ARVAGCWKLT NEQLGAILGL SPATASRLRS GGFRLDRSSK 
AFELGQYLVR LFRSLDALMG SDDLASISWL RTANLDLDGR PIDLIRTVRG LNDVADYVDD
HRAQI