| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Swit_1954 |
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| Symbol | |
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| ID | 5197185 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Sphingomonas wittichii RW1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009511 |
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| Strand | + |
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| Start bp | 2190440 |
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| End bp | 2191201 |
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| Gene Length | 762 bp |
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| Protein Length | 253 aa |
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| Translation table | 11 |
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| GC content | 70% |
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| IMG OID | 640581499 |
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| Product | two component transcriptional regulator |
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| Protein accession | YP_001262452 |
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| Protein GI | 148554870 |
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| COG category | [K] Transcription
[T] Signal transduction mechanisms |
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| COG ID | [COG0745] Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 31 |
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| Plasmid unclonability p-value | 0.897911 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 18 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTGGAGGC GCATGGCTTT CGACGGGGCG AATGGATTAT CAGGCGTGTC GGGGAGAGAA
GCAGAATTGA CCAACGCGCT GATCCTTGTG GCCGAGGACG AGCCCGAAAT CGCCGAAGTC
ATCGCCGCCT ATCTGGAGCG CGAGGGCTTC CGCACCGTCC GTGCCGCCGA CGGGCGCACC
GCGCTCGACC TCCATCTCGC GCTCAAGCCC GATCTCGTCA TGCTCGACGT GCAGATGCCG
CGGGTCAACG GCTGGGAGGT GCTGGCGGAG CTGCGGCGGC GCGGCGATAC GCCGGTGATC
ATGCTCACCG CGCTCGACCA GGACATCGAC AAGCTGCAGG CGCTGCGCAT CGGCGCCGAC
GATTATGTGG TCAAGCCGTT CAACGCGGTC GAGGTGGCGG CGCGTGCCCG TGCGGTGCTG
CGCCGGGCGG GCGGCGGCGG CGGCACCATG CTGCGGGTGG GGCCGATCGA AGTCGACCTC
GACAGCCATC TCGCCAGCGT CATCACCGGC GACGAGCCGG AGCGCCATGC CCTGCCGCTG
ACCCTCACCG AGTTCCGCAT CCTCGCCCAT ATGGCGCGGG CGCCGAAGCG GGCCTTCTCG
CGCGGGGAGC TGCTCGACGC GTGCCTGCCC GGCGGCGAGG CGCTCGAACG CACCGTCGAC
ACCCATCTCA GCAAGCTGCG GCGCAAGCTG GAGGATGCCG GGGCGACCGG CTTCGTCAAC
AATGTGCGCG GCGTCGGCTT CCGCCTGGCG GACCTCGGCT GA
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| Protein sequence | MWRRMAFDGA NGLSGVSGRE AELTNALILV AEDEPEIAEV IAAYLEREGF RTVRAADGRT
ALDLHLALKP DLVMLDVQMP RVNGWEVLAE LRRRGDTPVI MLTALDQDID KLQALRIGAD
DYVVKPFNAV EVAARARAVL RRAGGGGGTM LRVGPIEVDL DSHLASVITG DEPERHALPL
TLTEFRILAH MARAPKRAFS RGELLDACLP GGEALERTVD THLSKLRRKL EDAGATGFVN
NVRGVGFRLA DLG
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