Gene Swit_1947 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSwit_1947 
Symbol 
ID5199061 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSphingomonas wittichii RW1 
KingdomBacteria 
Replicon accessionNC_009511 
Strand
Start bp2180877 
End bp2181320 
Gene Length444 bp 
Protein Length147 aa 
Translation table11 
GC content68% 
IMG OID640581492 
Producthypothetical protein 
Protein accessionYP_001262445 
Protein GI148554863 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones32 
Plasmid unclonability p-value0.852274 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones18 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGATCAGCT ATGTGACGAT CGGCGTGAAC TCGATCGAGG CCGTGCTGCC CTTCTACGAC 
GCGGTGATGG CGGCGCTGGG CCATGAGCGC ATCATGCTGA GCGAAAAATG GATCGGCTAT
GGGCTGGCCG ACGGCATCTA CATGCCCAAG GTCTGGGTCT GCATCCCCGA GAACGGCAAG
CCCGCGACGG TGGGCAACGG ATCGATGGTC GGCCTGCACG CGCCGGGCCC GGAGGCGGTC
GACCGCGCCC ACGCCGCCGG TCTCGCCCAT GGCGGCACCG ACGAGGGGGC GCCCGGCCGC
CGGTCGCGCT ATCATCCGAG CTATTATATC GGCTATCTGC GCGATCCGGC GGGCAACAAG
CTCTCCGCCT TCTGCAACAC CGATGTCTTC CCGGAACCCG AAGGCTGGCC GCAGGCGGCG
GCCCGCCGCG CGCCGCTCGG CTGA
 
Protein sequence
MISYVTIGVN SIEAVLPFYD AVMAALGHER IMLSEKWIGY GLADGIYMPK VWVCIPENGK 
PATVGNGSMV GLHAPGPEAV DRAHAAGLAH GGTDEGAPGR RSRYHPSYYI GYLRDPAGNK
LSAFCNTDVF PEPEGWPQAA ARRAPLG