| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Swit_1944 |
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| Symbol | |
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| ID | 5200345 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Sphingomonas wittichii RW1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009511 |
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| Strand | - |
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| Start bp | 2178193 |
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| End bp | 2179482 |
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| Gene Length | 1290 bp |
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| Protein Length | 429 aa |
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| Translation table | 11 |
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| GC content | 73% |
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| IMG OID | 640581489 |
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| Product | TetR family transcriptional regulator |
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| Protein accession | YP_001262442 |
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| Protein GI | 148554860 |
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| COG category | [S] Function unknown |
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| COG ID | [COG3226] Uncharacterized protein conserved in bacteria |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 33 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 16 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | GTGCATGGAG GGGGGCGCCG TCGCCCAGGA GAAGCCGCCA TTCGTCCGTC GTCCCCATCC
TCCGCCGGCC TGCGCGTGAC CCGGCAGAAG CGGTCGGCGC TGCGGCAGCA GGAGATCGCC
GACGCGGCGA TCGCGGTGAT CGGCGAGCAG GGGCTGGCGG CGGTCACCCA CAAGATGGTC
GCCGACCGGG CCGGCGTGTC GCTGGCGGCG ACGACCTATT ATTTCGAGAC CAAGAACGAC
ATCGTTGCCG AGGCGTCGAG CCAGCTCCTC CACCATTATG CGGGGTCGCT CGGGCGGTTC
GCGGAGCGGC GCCAGGCGGG CCCCGCGTTC GATTTCCGCG CCTTCTTCGT GCGCATCCTC
GCCAATGTCG CGGACGGGCA CCGCTTCGAC ACGCTGGCCT GGTGCGAGAT CATGCTCGAC
GCCGCCCGGC GCGACGCCAC CCGCCGGCTG GCGCGCTCCT GGTTTGATCG GGTCCACGGC
CTGTGGCTCG ACATCGCCGC GCTGCTCGGG GTGGCGGACG GCGAGCGGGT GGCGCGATCG
GGTCTCGACC TGTGCATCGG GCTGTTCTTC ACCATCCTGC CGCTCGCGCT CGACGAGGCG
GAAGCGACGG CCTTGCCCTT CGCGGGCCTG CGCGAGCGGC CGGACGCCGT CGATGCGCCC
GGACTCGAGC GGATCGCGCC GCGCGAGGGG CGCAAGGCGG CCGAGACCCG GCGGCGCGTC
CTCGACGCCG CGATCGACAT CATGGCGGCG GAGGGCCCCG GCGGCATCAC CTATCGCGCG
GTCGCCGATC GGGCCGGGCT GACGCGGGCG GCGCCAACCT ATCATTTCCC GACGATCGAG
GGGCTGATCG GCGAGGTGCA GGTCGAACTG TTCGAGCGCA CCAAGGCGCG CTATCGCGAG
GGACTGGCCG GGCTCGACCG CGCCGCGCTC GACGAGGAGC AGCTTGTCCG CCGCACCGCC
GCGATCATGC GCCGCGAGGC GTCAGACTTC GGCCTGCTCG GCCTCGCCGA CCTCGCGATC
CGGCTGGAGG CGGCGCGCCG TCCCGCCTTC CGCCCGATCG TTCGCGCCCA TATCGAGGAC
CAGAACCGCG CCTGGCTCCG CATCCTGCGC CAGCTCGACC CCGAGGGCGC GGCGCCCGCC
GGGGCGATGA TCCTCCAGGC GCTGTGCATC GGCAAGCTGA TCCGCATCGT CGCCACCGGC
GGCCGCCGCA CCGACCTCGA CCGGCTCCGC GAGGAACTGG CCTACGACAT CGGCGCGATC
CTGTCGGGCA CCCACTGGAC CGGGTGCTAG
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| Protein sequence | MHGGGRRRPG EAAIRPSSPS SAGLRVTRQK RSALRQQEIA DAAIAVIGEQ GLAAVTHKMV
ADRAGVSLAA TTYYFETKND IVAEASSQLL HHYAGSLGRF AERRQAGPAF DFRAFFVRIL
ANVADGHRFD TLAWCEIMLD AARRDATRRL ARSWFDRVHG LWLDIAALLG VADGERVARS
GLDLCIGLFF TILPLALDEA EATALPFAGL RERPDAVDAP GLERIAPREG RKAAETRRRV
LDAAIDIMAA EGPGGITYRA VADRAGLTRA APTYHFPTIE GLIGEVQVEL FERTKARYRE
GLAGLDRAAL DEEQLVRRTA AIMRREASDF GLLGLADLAI RLEAARRPAF RPIVRAHIED
QNRAWLRILR QLDPEGAAPA GAMILQALCI GKLIRIVATG GRRTDLDRLR EELAYDIGAI
LSGTHWTGC
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