| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Swit_1941 |
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| Symbol | |
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| ID | 5200342 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Sphingomonas wittichii RW1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009511 |
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| Strand | + |
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| Start bp | 2175061 |
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| End bp | 2175723 |
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| Gene Length | 663 bp |
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| Protein Length | 220 aa |
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| Translation table | 11 |
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| GC content | 68% |
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| IMG OID | 640581486 |
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| Product | ribulose-5-phosphate 3-epimerase |
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| Protein accession | YP_001262439 |
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| Protein GI | 148554857 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG0036] Pentose-5-phosphate-3-epimerase |
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| TIGRFAM ID | [TIGR01163] ribulose-phosphate 3-epimerase |
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Plasmid Coverage information |
| Num covering plasmid clones | 34 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 17 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGACCAGCC CCGTCCTCAT CTCGCCGTCC ATCCTGTCCG CCGACTTCGC CAAGCTGGGC
GAGGAGGTCC GCGCGATCGA CGCGGCCGGG GCCGACTGGA TCCATGTCGA CGTGATGGAC
GGCCATTTCG TGCCGAACAT CACGATCGGC CCGGCGGTGG TGAAGGCGCT GCGCCCGCAC
ACCACCAAGC CGTTCGACGT CCACCTGATG ATCTCCCCGG TCGACGCCTT CCTCGAGGAT
TTCGCCAATG CCGGGGCGGA CATCATCACC GTCCATCCCG AGGCGGGCCC GCACGTCCAC
CGCACGATCC AGCGGATCAA GGGGCTGGGC AAGAAGGCCG GCGTCTCGCT GAACCCCGCC
ACCCCGGCCA AGATGCTCGA TTATATATTG GAGGACGTCG ACCTCGTCCT GGTGATGAGC
GTCAATCCCG GCTTCGGCGG ACAGAGCTTC ATCGAGAGCC AGCTCCGCAA GATCGAGGCG
ATCCGCAAGA TGATCGACAA GAGCGGCAAG GACATCCACC TGGAGGTCGA CGGCGGCGTC
GACGCCAACA CCGCGCCGCG CGTGATCGCG GCGGGCGCGA CGGCGCTGGT CGCCGGCACC
GCGACCTTCC GGGGCGGCCC GTCCCAATAC GCCGCCAACA TCGCGGGCCT GCGCAAGGCG
TGA
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| Protein sequence | MTSPVLISPS ILSADFAKLG EEVRAIDAAG ADWIHVDVMD GHFVPNITIG PAVVKALRPH
TTKPFDVHLM ISPVDAFLED FANAGADIIT VHPEAGPHVH RTIQRIKGLG KKAGVSLNPA
TPAKMLDYIL EDVDLVLVMS VNPGFGGQSF IESQLRKIEA IRKMIDKSGK DIHLEVDGGV
DANTAPRVIA AGATALVAGT ATFRGGPSQY AANIAGLRKA
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