| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Swit_1936 |
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| Symbol | hemC |
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| ID | 5196364 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Sphingomonas wittichii RW1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009511 |
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| Strand | + |
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| Start bp | 2169683 |
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| End bp | 2170609 |
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| Gene Length | 927 bp |
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| Protein Length | 308 aa |
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| Translation table | 11 |
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| GC content | 75% |
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| IMG OID | 640581481 |
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| Product | porphobilinogen deaminase |
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| Protein accession | YP_001262434 |
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| Protein GI | 148554852 |
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| COG category | [H] Coenzyme transport and metabolism |
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| COG ID | [COG0181] Porphobilinogen deaminase |
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| TIGRFAM ID | [TIGR00212] porphobilinogen deaminase |
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Plasmid Coverage information |
| Num covering plasmid clones | 23 |
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| Plasmid unclonability p-value | 0.0833928 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 17 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACCGCTT CGCTCTCCCG TCCCCTCCGT CTCGGCACCC GCGGATCGCC GCTCGCGCTG
ACCCAGGCCC GCATGGTGAT CGCCGCGCTG CGGGCCGCCC ATGGATGGGA CGAAACCGCG
GTCGAGATCG TCGCGATCAA GACCAGCGGC GACCGCATCC AGGATCGCGC GCTGGCCGAG
GTCGGCGGCA AGGCGCTGTG GACCAAGGAG CTCGACATCG CCCTGGCGGA CGGCACGATC
GACTTCGCGG TCCATTCGAT GAAGGACGTC GAGACGATCC GCCCGGCCGC GATCGTCATC
GCCGCGATGC TGCCCCGCGC CGACGTGCGC GACCGGCTGA TCGGCGCCGC CTCGCTGGCC
GCGCTGCCGC AGGGCGCCCG GGTCGGCACC TCCTCGCCGC GCCGGTCGGC GCAGGTCCGG
CGCGCGCGGC CCGATGTCGG GATCGTGCTG TTCCGCGGCA ATGTCGACAC CCGCCTCGGC
AAGCTGGCGG CGGGCGAGGC GGAGGCGACG CTGCTCGCCG GCGCCGGCCT GATCCGGCTC
GGCCGCGACG AGATCGGCCA TCCGATCCCG ATCGAGGAGA TGCTGCCCGC CCCGGCGCAG
GCCGCGGTCG GCATCGAGAC GCTGGCCGAG CGAACGGACG TGCGCGCGCT GCTCGGCGCG
ATCGACGACG CGCCGACCAA CGCCTCCGTT TCGGCCGAAC GCGCGCTGCT CGCCGCGCTC
GGCGCCGATT GCCGCTCGCC GGTGGCCGCG CTCGCCGTCC GGTCGGGCGC CGGGCTGCTG
CTGCGCGCCG AGATCATGAC CGAGGACGGC AGCGAGCATC GCTCGGGCGA GGCGATGCTG
TTCGAGACCG GCGACGCCGC CGCGCTCGCC CACCGGCTGC TCGACGGCGC CTCGCCCCGC
CTCCGCGCGC TGTTCACCGG CGCATGA
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| Protein sequence | MTASLSRPLR LGTRGSPLAL TQARMVIAAL RAAHGWDETA VEIVAIKTSG DRIQDRALAE
VGGKALWTKE LDIALADGTI DFAVHSMKDV ETIRPAAIVI AAMLPRADVR DRLIGAASLA
ALPQGARVGT SSPRRSAQVR RARPDVGIVL FRGNVDTRLG KLAAGEAEAT LLAGAGLIRL
GRDEIGHPIP IEEMLPAPAQ AAVGIETLAE RTDVRALLGA IDDAPTNASV SAERALLAAL
GADCRSPVAA LAVRSGAGLL LRAEIMTEDG SEHRSGEAML FETGDAAALA HRLLDGASPR
LRALFTGA
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