Gene Swit_1923 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSwit_1923 
Symbol 
ID5197285 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSphingomonas wittichii RW1 
KingdomBacteria 
Replicon accessionNC_009511 
Strand
Start bp2156169 
End bp2156543 
Gene Length375 bp 
Protein Length124 aa 
Translation table11 
GC content72% 
IMG OID640581468 
Producthypothetical protein 
Protein accessionYP_001262421 
Protein GI148554839 
COG category[L] Replication, recombination and repair 
COG ID[COG0328] Ribonuclease HI 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones36 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones23 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGAACAAGC CGACCCCCAT TTATTTCGAC GGCGGCTGCC GCCCCAATCC CGGCCCGATC 
GAGACCGCCA CGGTGATGGC GGGGGTCGCC GACATCCGCC GGGGCGCGGG CGACGGCGAC
AATGAGGACG CCGAATGGAC GGCGCTGCTC CATGCGCTCG AACGCGCGGC GGCCGAAGGG
CTGTCCGACA TCCTCCTGCT CGGGGATTCG CTGTCGGTGA TCCGCCAGGC GTCGGGGCGG
CAGACGGTCC GCCGGCCCTG GCTCGACCGC TTCCGTGAAG CGACGCGGGG GTTCGACCGG
GTGCGGCTGC GCCATGTCGG CCGCAAGCGC AACCTGGCCG GGATCGCCCT CGAGAAAATG
CACCGGGGCC CGTGA
 
Protein sequence
MNKPTPIYFD GGCRPNPGPI ETATVMAGVA DIRRGAGDGD NEDAEWTALL HALERAAAEG 
LSDILLLGDS LSVIRQASGR QTVRRPWLDR FREATRGFDR VRLRHVGRKR NLAGIALEKM
HRGP