Gene Swit_1913 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSwit_1913 
Symbol 
ID5196281 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSphingomonas wittichii RW1 
KingdomBacteria 
Replicon accessionNC_009511 
Strand
Start bp2146285 
End bp2147355 
Gene Length1071 bp 
Protein Length356 aa 
Translation table11 
GC content70% 
IMG OID640581458 
Productacyltransferase 3 
Protein accessionYP_001262411 
Protein GI148554829 
COG category[I] Lipid transport and metabolism 
COG ID[COG1835] Predicted acyltransferases 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones32 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones22 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGCAGGTCC GGCACGAACT TCGTCCGCTC ACCTCGGCGC GCGGGATCGC GGCCTGGTAT 
GTCGTGCTCT ACCATATCCG CGAGAGCGCG GTCGGGTCGC TGCCCCCGGC GCTGATCGAT
TTCCTCGCCA AGGGCTATCT GGCGGTCGAC TTCTTCTTCG TGCTGTCGGG CTTCGTCATC
TGGCTCAACT ATGGCCGGCT GCTCGGCGAT CATGGCGCCC GCGCGGTGCC GCATTTCCTG
TGGCGGCGGC TGGCGCGCAT CTATCCGCTC CACCTGCTGA TCCTGCTCGC CGCGGTCGCC
TTCGCGGCGG TCTGCGTCGC CACTGGGCGC GGCATGCCGC AGGGCTATGC CTGGGGCACG
CTGCCCTTCC ACCTGCTGCT GATGCAGAAT TGGGGCTTCC TGCCGCTCGG CTGGAACGTC
CCCGCCTGGT CGATCAGCTG CGAGCTGGGC GCCTATCTGC TGTTCCCGCT GCTGATCGCG
GCGGTCGACT GGCGGCGGAC GCCGACGCCG GTGCTGCTCG CCCTGCTCGC GCTGCTGATG
GCCGGGCTAT GGGGCCTGTT CACGGCGATG GGCCAGCCCC TTCTCGGCAA CGAGATCGCC
CATCTCGGCC TGGCGCGCTG CCTGTTCGAA TTCGGGATGG GGACCCTGGT CGCGGCGCTG
TGGCTGCGCT GGCGCGAGGC GCCGCGGCGG CCCGCCACGA TCGCCGCGTT GCTCTCGGCC
ATCGGGCTCG CCGCGCGGCT CGCGGGCGCG CCCGAGACGC TCGCCTTGCC CTTCGTCTTC
GTCACGCTGC TGCTGTTCCT GGCGCTGACG TCCGAAGGGC GGACGCCGAT GAAGGGCCGC
GCGATCCACT GGTTCGGCGA GATCAGCTAT GCGACCTATC TGGCGCACTC GCTGCTGTTC
CTGCTCTTCA AGATCCTGTT CGTCCGCGAC GCGGGCGACG TGTCGCTGCC GCTGCTCGGC
CTGTTCCTGC TGATCGTGCT GGCGGCGTCG GCGGCGCTCT ACCACGGCTT CGAGCTGCCC
GCGCAGAAAT GGATGAACCG GCGCGGGCCG AAACGGCCGG TCGAGTCATA A
 
Protein sequence
MQVRHELRPL TSARGIAAWY VVLYHIRESA VGSLPPALID FLAKGYLAVD FFFVLSGFVI 
WLNYGRLLGD HGARAVPHFL WRRLARIYPL HLLILLAAVA FAAVCVATGR GMPQGYAWGT
LPFHLLLMQN WGFLPLGWNV PAWSISCELG AYLLFPLLIA AVDWRRTPTP VLLALLALLM
AGLWGLFTAM GQPLLGNEIA HLGLARCLFE FGMGTLVAAL WLRWREAPRR PATIAALLSA
IGLAARLAGA PETLALPFVF VTLLLFLALT SEGRTPMKGR AIHWFGEISY ATYLAHSLLF
LLFKILFVRD AGDVSLPLLG LFLLIVLAAS AALYHGFELP AQKWMNRRGP KRPVES