| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Swit_1910 |
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| Symbol | |
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| ID | 5200983 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Sphingomonas wittichii RW1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009511 |
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| Strand | - |
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| Start bp | 2140755 |
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| End bp | 2142965 |
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| Gene Length | 2211 bp |
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| Protein Length | 736 aa |
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| Translation table | 11 |
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| GC content | 69% |
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| IMG OID | 640581455 |
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| Product | TonB-dependent receptor |
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| Protein accession | YP_001262408 |
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| Protein GI | 148554826 |
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| COG category | [P] Inorganic ion transport and metabolism |
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| COG ID | [COG4771] Outer membrane receptor for ferrienterochelin and colicins |
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| TIGRFAM ID | [TIGR01783] TonB-dependent siderophore receptor |
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Plasmid Coverage information |
| Num covering plasmid clones | 31 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 25 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTTGAAGC TGGGGGCGGC GACCGCCGCG ATGATCGGGG CGTGGACCGG CGCCCAGGCG
CAGGCGCCGG CGGACGCGCA GGGCGATGCC GGCGGCCAGG CGATCCAGGA CATCGTCGTC
ACCGCGACCC GCACCGGCGC GACGCAGCTC CAGCGGACCC CGATCGCGAT TTCGGCCTTC
TCGGCCGAGC AGCTCGATGC GTCGGGAATC GTCAACGTCA AGGACCTGGT CTCGGCGACG
CCGAACCTGA GCGTCGGGCA GGCGACTGCC AGCGCGCAAA TCTACATCCG CGGCATCGGC
AGCAACAATG TATTCATCGG CTCCGATCCC GACGTGACCG TCCAGTCGGA CGGCGTCTAC
ATCGCCCGCG CCTTCGGCCA GTTCCTCGAC TTCGTCGACG TCGACCGGAT CGAGGTGCTG
CGCGGCCCGC AGGGGACGCT CTACGGCCGC AACGCCGTCG GCGGGACGAT CAACATCATC
TCGCGCAAGC CGTCCGACAG CTTCGAGGGA CGCGCGCAGC TCAGCGCCGG CACCGACGAC
CTGGTCCAGG CGCAGGCCTA TCTCAGCGGG CCGATCGTGC CGGGCGTCCT CCAGGCGAGC
ATCGCCGGCA ACATCCTGCG CCGCGACGGC TTCGTCGAGA ATATCGCGCC GGGCGGCAAG
GACGTCGGCA ACGCCCGCCG CGAAGGGGTG CGCGGCCAGC TCCGCTTCGT GCCCAGCGCG
ACGGTGGAGG CGATCACCCG GTTCGACTGG AACGGCTCGT TCGAGCGGAT GGACGCCTAT
TCCCACCTGC TCGCGCCGGT CGCGGCGGCG CCGCTCGCGA CCTCGCTGAT CGGCGACTAT
AGCCGCACCG CGCTCGACAG CCCGCAGAAC AGCCGGACCC GCATCTGGGG CATATCCCAG
GAGGTCAATG TCGAGCTGAG CGACGTGTTC AAGCTCAAGT CGCTGACCGC CTATCGGCGC
AGTGCCTATC GGGTGAACGT CGACATCGAC GGGACCGAGC TGCGCGGCAC CTATGGTTTC
CAGACCGACC GGTCGAAGCA GTTCAGCCAG GAGCTCAACC TCGGCATAGA CCTGCCGCGC
TTCGAGGGCG TGCTCGGCGC CTATTATTTC CGCGAATGGC AGCGCAGCAC CCTGCGCAAC
ACGACGCCGC CGAGCGCGGT GACGGCGCTG GCGCGGGCGA CCGAGACCAC CGTCAATCCG
GTCGCCAGGG TGCGATCGCA GGCGCTGTTC GGGCAGGGGA CCTATCATGT CACCGACGCG
CTCGGCGTCA CCCTCGGCCT GCGCTACACC CAGGACCGGC GCGGGATCGA CCAGCGGCTG
ATGCGGGTGC CGTTCGATCC TGCCTTGCCG ACGATCGGCT TCGCGGCGTC GCCGCCGCCA
CGCAACTACC ACGCCTGGAC GCCGCGCGTC AGCGTCGACT GGCAGGCCAC CCGCGACGTC
ATGCTCTATG CCTCGGTCAC GCGCGGCTAC AAGAGCGGCG GCACCAATTT CTCGGCGACC
AACCTGGCGG CGCTCACCTT CGATCCGGAG ACGATCTGGA GCTATGAGGC GGGGATCAAG
AGCGACTGGT TCGACCGGCG GCTGCGGGTC AACCTGACCG GTTTCTACTA CGACTATTCG
GATCTGCAGA TCCAGTCGCT GCTGGCGCCC GGCGTCGTCG CGATCGGCAA CGCGGCCAGC
GCCCGGGTGA AGGGGCTCGA GCTTGAGACG ATCGCCCGGC CGGCGGCGGG GCTGACTTTC
ACCTTCAACT ATGCTCTGCT CGACAGCGAG TATCGCCATT TCCCCAATGC GGCGGTCCCG
TCGCAGCTCC GCCCCTATGT CCAGGGTTCG CCGCGCTACG ACGCCGCGAC CAACACCTTC
GATGCGACCG GCAACCGCCT GACCGCCGCG CCCCGCTCCT CGCTGTCCGC CAGCGCGCAA
TATGAGCATG CGCTGGGCAG CGGCACGGCC TTCGTCCGTG GCGAATATTA CTGGCAGAGC
CGCGCCCATT ATGATCCGTC CAACGCGCTG ATCATGAGCC AGAAGGCCTA TGACCTGATC
AACCTGTCGG CCGGCTATCG CGGCGCGGGC GATCGGTGGA GCGCGCGGGT CGTCGCGAAG
AACGTGACGG ACAAGCAATA TCTGATCACC GTCGCCGCGA ACGGCCTGGT TCCGGCCGGC
CTCGCCGGGG CGCCGCGCAC CGTCGCGCTC CAGCTGACCT GGAACTGGTG A
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| Protein sequence | MLKLGAATAA MIGAWTGAQA QAPADAQGDA GGQAIQDIVV TATRTGATQL QRTPIAISAF
SAEQLDASGI VNVKDLVSAT PNLSVGQATA SAQIYIRGIG SNNVFIGSDP DVTVQSDGVY
IARAFGQFLD FVDVDRIEVL RGPQGTLYGR NAVGGTINII SRKPSDSFEG RAQLSAGTDD
LVQAQAYLSG PIVPGVLQAS IAGNILRRDG FVENIAPGGK DVGNARREGV RGQLRFVPSA
TVEAITRFDW NGSFERMDAY SHLLAPVAAA PLATSLIGDY SRTALDSPQN SRTRIWGISQ
EVNVELSDVF KLKSLTAYRR SAYRVNVDID GTELRGTYGF QTDRSKQFSQ ELNLGIDLPR
FEGVLGAYYF REWQRSTLRN TTPPSAVTAL ARATETTVNP VARVRSQALF GQGTYHVTDA
LGVTLGLRYT QDRRGIDQRL MRVPFDPALP TIGFAASPPP RNYHAWTPRV SVDWQATRDV
MLYASVTRGY KSGGTNFSAT NLAALTFDPE TIWSYEAGIK SDWFDRRLRV NLTGFYYDYS
DLQIQSLLAP GVVAIGNAAS ARVKGLELET IARPAAGLTF TFNYALLDSE YRHFPNAAVP
SQLRPYVQGS PRYDAATNTF DATGNRLTAA PRSSLSASAQ YEHALGSGTA FVRGEYYWQS
RAHYDPSNAL IMSQKAYDLI NLSAGYRGAG DRWSARVVAK NVTDKQYLIT VAANGLVPAG
LAGAPRTVAL QLTWNW
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