Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Swit_1910 |
Symbol | |
ID | 5200983 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Sphingomonas wittichii RW1 |
Kingdom | Bacteria |
Replicon accession | NC_009511 |
Strand | - |
Start bp | 2140755 |
End bp | 2142965 |
Gene Length | 2211 bp |
Protein Length | 736 aa |
Translation table | 11 |
GC content | 69% |
IMG OID | 640581455 |
Product | TonB-dependent receptor |
Protein accession | YP_001262408 |
Protein GI | 148554826 |
COG category | [P] Inorganic ion transport and metabolism |
COG ID | [COG4771] Outer membrane receptor for ferrienterochelin and colicins |
TIGRFAM ID | [TIGR01783] TonB-dependent siderophore receptor |
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Plasmid Coverage information |
Num covering plasmid clones | 31 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 25 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGTTGAAGC TGGGGGCGGC GACCGCCGCG ATGATCGGGG CGTGGACCGG CGCCCAGGCG CAGGCGCCGG CGGACGCGCA GGGCGATGCC GGCGGCCAGG CGATCCAGGA CATCGTCGTC ACCGCGACCC GCACCGGCGC GACGCAGCTC CAGCGGACCC CGATCGCGAT TTCGGCCTTC TCGGCCGAGC AGCTCGATGC GTCGGGAATC GTCAACGTCA AGGACCTGGT CTCGGCGACG CCGAACCTGA GCGTCGGGCA GGCGACTGCC AGCGCGCAAA TCTACATCCG CGGCATCGGC AGCAACAATG TATTCATCGG CTCCGATCCC GACGTGACCG TCCAGTCGGA CGGCGTCTAC ATCGCCCGCG CCTTCGGCCA GTTCCTCGAC TTCGTCGACG TCGACCGGAT CGAGGTGCTG CGCGGCCCGC AGGGGACGCT CTACGGCCGC AACGCCGTCG GCGGGACGAT CAACATCATC TCGCGCAAGC CGTCCGACAG CTTCGAGGGA CGCGCGCAGC TCAGCGCCGG CACCGACGAC CTGGTCCAGG CGCAGGCCTA TCTCAGCGGG CCGATCGTGC CGGGCGTCCT CCAGGCGAGC ATCGCCGGCA ACATCCTGCG CCGCGACGGC TTCGTCGAGA ATATCGCGCC GGGCGGCAAG GACGTCGGCA ACGCCCGCCG CGAAGGGGTG CGCGGCCAGC TCCGCTTCGT GCCCAGCGCG ACGGTGGAGG CGATCACCCG GTTCGACTGG AACGGCTCGT TCGAGCGGAT GGACGCCTAT TCCCACCTGC TCGCGCCGGT CGCGGCGGCG CCGCTCGCGA CCTCGCTGAT CGGCGACTAT AGCCGCACCG CGCTCGACAG CCCGCAGAAC AGCCGGACCC GCATCTGGGG CATATCCCAG GAGGTCAATG TCGAGCTGAG CGACGTGTTC AAGCTCAAGT CGCTGACCGC CTATCGGCGC AGTGCCTATC GGGTGAACGT CGACATCGAC GGGACCGAGC TGCGCGGCAC CTATGGTTTC CAGACCGACC GGTCGAAGCA GTTCAGCCAG GAGCTCAACC TCGGCATAGA CCTGCCGCGC TTCGAGGGCG TGCTCGGCGC CTATTATTTC CGCGAATGGC AGCGCAGCAC CCTGCGCAAC ACGACGCCGC CGAGCGCGGT GACGGCGCTG GCGCGGGCGA CCGAGACCAC CGTCAATCCG GTCGCCAGGG TGCGATCGCA GGCGCTGTTC GGGCAGGGGA CCTATCATGT CACCGACGCG CTCGGCGTCA CCCTCGGCCT GCGCTACACC CAGGACCGGC GCGGGATCGA CCAGCGGCTG ATGCGGGTGC CGTTCGATCC TGCCTTGCCG ACGATCGGCT TCGCGGCGTC GCCGCCGCCA CGCAACTACC ACGCCTGGAC GCCGCGCGTC AGCGTCGACT GGCAGGCCAC CCGCGACGTC ATGCTCTATG CCTCGGTCAC GCGCGGCTAC AAGAGCGGCG GCACCAATTT CTCGGCGACC AACCTGGCGG CGCTCACCTT CGATCCGGAG ACGATCTGGA GCTATGAGGC GGGGATCAAG AGCGACTGGT TCGACCGGCG GCTGCGGGTC AACCTGACCG GTTTCTACTA CGACTATTCG GATCTGCAGA TCCAGTCGCT GCTGGCGCCC GGCGTCGTCG CGATCGGCAA CGCGGCCAGC GCCCGGGTGA AGGGGCTCGA GCTTGAGACG ATCGCCCGGC CGGCGGCGGG GCTGACTTTC ACCTTCAACT ATGCTCTGCT CGACAGCGAG TATCGCCATT TCCCCAATGC GGCGGTCCCG TCGCAGCTCC GCCCCTATGT CCAGGGTTCG CCGCGCTACG ACGCCGCGAC CAACACCTTC GATGCGACCG GCAACCGCCT GACCGCCGCG CCCCGCTCCT CGCTGTCCGC CAGCGCGCAA TATGAGCATG CGCTGGGCAG CGGCACGGCC TTCGTCCGTG GCGAATATTA CTGGCAGAGC CGCGCCCATT ATGATCCGTC CAACGCGCTG ATCATGAGCC AGAAGGCCTA TGACCTGATC AACCTGTCGG CCGGCTATCG CGGCGCGGGC GATCGGTGGA GCGCGCGGGT CGTCGCGAAG AACGTGACGG ACAAGCAATA TCTGATCACC GTCGCCGCGA ACGGCCTGGT TCCGGCCGGC CTCGCCGGGG CGCCGCGCAC CGTCGCGCTC CAGCTGACCT GGAACTGGTG A
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Protein sequence | MLKLGAATAA MIGAWTGAQA QAPADAQGDA GGQAIQDIVV TATRTGATQL QRTPIAISAF SAEQLDASGI VNVKDLVSAT PNLSVGQATA SAQIYIRGIG SNNVFIGSDP DVTVQSDGVY IARAFGQFLD FVDVDRIEVL RGPQGTLYGR NAVGGTINII SRKPSDSFEG RAQLSAGTDD LVQAQAYLSG PIVPGVLQAS IAGNILRRDG FVENIAPGGK DVGNARREGV RGQLRFVPSA TVEAITRFDW NGSFERMDAY SHLLAPVAAA PLATSLIGDY SRTALDSPQN SRTRIWGISQ EVNVELSDVF KLKSLTAYRR SAYRVNVDID GTELRGTYGF QTDRSKQFSQ ELNLGIDLPR FEGVLGAYYF REWQRSTLRN TTPPSAVTAL ARATETTVNP VARVRSQALF GQGTYHVTDA LGVTLGLRYT QDRRGIDQRL MRVPFDPALP TIGFAASPPP RNYHAWTPRV SVDWQATRDV MLYASVTRGY KSGGTNFSAT NLAALTFDPE TIWSYEAGIK SDWFDRRLRV NLTGFYYDYS DLQIQSLLAP GVVAIGNAAS ARVKGLELET IARPAAGLTF TFNYALLDSE YRHFPNAAVP SQLRPYVQGS PRYDAATNTF DATGNRLTAA PRSSLSASAQ YEHALGSGTA FVRGEYYWQS RAHYDPSNAL IMSQKAYDLI NLSAGYRGAG DRWSARVVAK NVTDKQYLIT VAANGLVPAG LAGAPRTVAL QLTWNW
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