| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Swit_1904 |
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| Symbol | |
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| ID | 5197100 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Sphingomonas wittichii RW1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009511 |
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| Strand | - |
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| Start bp | 2133733 |
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| End bp | 2136000 |
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| Gene Length | 2268 bp |
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| Protein Length | 755 aa |
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| Translation table | 11 |
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| GC content | 71% |
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| IMG OID | 640581449 |
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| Product | malic enzyme |
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| Protein accession | YP_001262402 |
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| Protein GI | 148554820 |
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| COG category | [C] Energy production and conversion |
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| COG ID | [COG0280] Phosphotransacetylase
[COG0281] Malic enzyme |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 24 |
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| Plasmid unclonability p-value | 0.894987 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 27 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGAAGACA CGCTTCGTCG GGCTGCGCTC GATTATCACC GATTCCCCAA TCCGGGGAAG
ATGCGCATCG AGCCGACGAA GCGGATGGTC AACCAGCGCG ACCTGGCGCT CGCCTATTCG
CCGGGCGTCG CCGCGCCGTG CGAGGAGATC GCCGCCGATC CCGACAAGGC GCTCGACTAT
ACCGCGCGCG GCAACCTCGT CGCGGTGATC TCGAACGGCA CCGCCGTGCT CGGCCTCGGC
GCGATCGGGG CGCTGGCGTC GAAGCCGGTG ATGGAGGGCA AGGCCGTCCT GTTCAAGAAG
TTCGCCGGGA TCGACGTGTT CGACATCGAG ATCGACACCA CCGATCCCGA CCGCTTCGTC
GAGGCCGTGG CGCTGCTCGA ACCGACCTTC GGCGGCATCA ACCTGGAGGA CATCAAGGCG
CCCGAATGCT TCGCGATCGA GGCGGCGCTC AAGGCGCGGA TGAACATCCC GGTCTTCCAC
GACGACCAGC ACGGCACCGC GATCGTCGTG GCGGCGGCGG TGCGCAACGC GCTGGTGCTG
CAGAACATCA GCCTGTCCGA GGCGAAGCTC GTCACCTCGG GCGCGGGGGC GGCGGCGCTC
GCCTGCGTCG ACCTGCTCGT GTCGATGGGC CTGCCGGCCG ACAATGTCAC GCTGACCGAC
AAGGACGGCG TGGTCCATGC CGGGCGGCCG GGCATGGCGC CCAACATGGC GCGCTATGCC
CGCGCGACCG ACGCCCGGAC ATTGCCCGAG GTGCTGCCCG GCGCGAACAT CTTCCTCGGC
CTGTCGGCGC CCGGCGTGCT CAAGCCCGAA TGGCTGCCGC TGCTGTCGGA CCGGCCGCTG
ATCTTCGCGC TCGCCAATCC CGAGCCGGAG ATATTGCCCG AGATCGCGCG CGCCGCGCGG
CCCGACGCGA TCGTCGCGAC GGGGCGGTCG GACTATGCCA ACCAGGTCAA CAACGTCCTG
TGCTTCCCCT ATATCTTCCG CGGCGCGCTC GATGTCGGCG CGACCGCGAT CACCGAGGCG
ATGAAGGTCG CGGCGGCCGA GGCGATCGCC GCGCTCGCCC GCCTGCCCGC GCATGAGAGC
GTCGTCCAGG CCTATGGCGG CGGCAAGCTC GCCTTCGGCC CCGACTATAT CATCCCGACC
CCGTTCGACC CGCGCCTGAT CGTCGAGATC GCGCCGGCGG TGGCGCAGGC GGCGATCGCC
TCCGGCGTAG CGCGGCGGCC GATCGACATT GACGCCTATC GCCGCGGCCT GGCGCAGCAG
AACGCCCGAT CGGGCCAGCT GATGATGCCG GTGTTCGAGG GCGCGCGCGG CGCCAGGGCC
CGGATCGCCT ATGGCGAGGG CGAGGACGAG CGCGTGCTGC GCGCCGTCCA GGACGCGCTC
GACGACGGTT TCGTCCGGCC GACGCTGGTC GCGCGCCGCC GCATCCTGGC GGAGAAGATG
CCGCGCCTCG GCCTGCGCTT CGAACTCGAC CGCGACGTCG ACCTGGTCGA TCCCGAGACC
GACCATGCGA TCCTCGGCCC GCTGGTCGAT GCCTATCGCG CCGTCGCCGG GCGGCGCGGC
GTGCCCTCGG CCGAGATCGT CCGCCACGTC TATCGCCGGC CGACCGTCAC CGCGGCGATG
CTGCTGCGGA CCGGCCATGT CGAGGCGGCG CTGGTCGGCG GCAATTCGGA ATATTGGGGC
CAGGTCGAGC ATGTGCTGCG CACGATCGAC CGGACGGAAG GGGCCCAGCG CGTCTATGCG
CTGTCGGGGC TGATCCTCGA CGCGGGCGCG CTGTTCATCA CCGACACCCA TATGGTGCCC
GATCCGACGC CCGAGCAGAT CGCCGAGATG ACCGTGCTCG CCGAACGGGC GGTGCGGCAG
TTCGGGCTCG ACCCGCGCGT CGCGCTGCTG TCGCACTCCA ATTTCGGCGC GTCGCACAGC
CCCAGCGCGC GCAAGATGCG CGAGGCGGTG AAGATCGTCC GCCGGATCGC GCCCGACCTG
TGCGTCGACG GGGAGATGCA TGCCGACGTC GCGCTGTCGC AGTCGCTGCG CGAGCGGCTC
GTCCCCGACC AGCGCTTCGA AGGGTCGGCC AACCTGCTGG TCATGCCGAA CCTCGACGCC
GCCAACATCA CCCTGACCGC GCTCGGCGCA TCGTCGAGCT CGCCGACGGT CGGGCCGATG
CTGATGGGGC TGAGCCAGCC GATCCACGTC CTCACCCCCG GCGTCACCTC GCGCGGGATA
TTGAACCTGA CGGCGATCGC GGCGGCGGAG GTGGCCCGGC GGCGCTGA
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| Protein sequence | MEDTLRRAAL DYHRFPNPGK MRIEPTKRMV NQRDLALAYS PGVAAPCEEI AADPDKALDY
TARGNLVAVI SNGTAVLGLG AIGALASKPV MEGKAVLFKK FAGIDVFDIE IDTTDPDRFV
EAVALLEPTF GGINLEDIKA PECFAIEAAL KARMNIPVFH DDQHGTAIVV AAAVRNALVL
QNISLSEAKL VTSGAGAAAL ACVDLLVSMG LPADNVTLTD KDGVVHAGRP GMAPNMARYA
RATDARTLPE VLPGANIFLG LSAPGVLKPE WLPLLSDRPL IFALANPEPE ILPEIARAAR
PDAIVATGRS DYANQVNNVL CFPYIFRGAL DVGATAITEA MKVAAAEAIA ALARLPAHES
VVQAYGGGKL AFGPDYIIPT PFDPRLIVEI APAVAQAAIA SGVARRPIDI DAYRRGLAQQ
NARSGQLMMP VFEGARGARA RIAYGEGEDE RVLRAVQDAL DDGFVRPTLV ARRRILAEKM
PRLGLRFELD RDVDLVDPET DHAILGPLVD AYRAVAGRRG VPSAEIVRHV YRRPTVTAAM
LLRTGHVEAA LVGGNSEYWG QVEHVLRTID RTEGAQRVYA LSGLILDAGA LFITDTHMVP
DPTPEQIAEM TVLAERAVRQ FGLDPRVALL SHSNFGASHS PSARKMREAV KIVRRIAPDL
CVDGEMHADV ALSQSLRERL VPDQRFEGSA NLLVMPNLDA ANITLTALGA SSSSPTVGPM
LMGLSQPIHV LTPGVTSRGI LNLTAIAAAE VARRR
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