Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Swit_1901 |
Symbol | |
ID | 5197097 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Sphingomonas wittichii RW1 |
Kingdom | Bacteria |
Replicon accession | NC_009511 |
Strand | + |
Start bp | 2130061 |
End bp | 2132295 |
Gene Length | 2235 bp |
Protein Length | 744 aa |
Translation table | 11 |
GC content | 65% |
IMG OID | 640581446 |
Product | TonB-dependent receptor |
Protein accession | YP_001262399 |
Protein GI | 148554817 |
COG category | [P] Inorganic ion transport and metabolism |
COG ID | [COG1629] Outer membrane receptor proteins, mostly Fe transport |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 27 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 29 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAGGGAGA TTTCAAGGGC GCGCGTCATC GGAATGCTGC TTGCCGGGGC CAGCCTGTCC GCCGTTCCGG CCCATGCCCA GGATGCCACC TCCCCCGCAG CCGAGGCCTC CCAAGGCGGC CTGGCCGACA TCGTCGTCAC CGCCGAGAAG CGCCCGAGCA TCGCGCAGCG CGCGCCCATC GCCCTCTCGG TCGTCACCTC CGAGGCGATC AAGCGGCAGG GCGTCGGCAA CGTCGCCGAC CTCACCACCC TCACCCCCAG CGTCGGCTTC TCGCAGAACG GCGCCAACAC GGTGATCACC GTCCGCGGCG TTTCCAGCCG CGACACCAAC CAGCTCGGCG ACCCCGCCGT CTCGATCAGC CTCGACGGCT TCTACTTCCA GCGCTCGCTG GGCCTCAACA TCGCGCTGTT CGACCTCGAG CGGGTGGAGG CGCTGCGCGG CCCGCAGGGC ACGCTGCTCG GCCGCAACGC GACCGGCGGC GCGCTCAACA TCATCACCGC CAAGCCGACC GACAGCTTCT CGGCCGCGCT GACCGGCGAG GTCGGCAATT ACGACCTGAT CGCGACGCAG GGCTATGTGA ACATCCCGGT CAGCGACAAG GTGAAGCTGC GCGCCGCCTT CATGACGCGC GACCGCGACG GCTATCGCCA CAACGCCCCG GCCCGCGATG GCGACGACGA CCACAGCCGC GCCGCCCGCC TCCATCTGCT GTTCCAGCCG ACCGACCGGT GGGACATCCT GCTGACCGGC GAATATTCGC ACCAGGACGG CGTCGGCCCG GTGATCCAGC CCGTCGCCCA CCGCTTCCTG CCCAACGGGC AGCTCGACAC CAGCCGGGTC GACATCCCCG GCGACGGCAA GCGCTTCGCG GTTCCGTCCG GCGGGTTCAT CCGGCTCAAT TCCTATAATT TCCGCTGGAA CACCAACTAC GACCTCGACT TCGCGACGCT GACCTATCTG GGCGGCTATC GCTCGCTGAA ATATGCCAAT GTCCGCACCC TGGGCGCCGA CTATGCCACC AACCGCCGCA ACTTCACCTT CGACCAGCAT GAGCGCCCCC GGTCCTGGAA CCACGAGCTG CGCCTGTCGT CGAAATCCGA CACGCCGCTG ATCTGGCAGG CCGGTCTCTA TTATTTCCGC GAGAAGAACA GCACCGTGTC GCTGTTCCGC GACTTCCGCG TGCCGGGCCA GTTCCCGACC CCGGCCGCCT GCCTGTGCGA ACCCGGCGTC GAGCTTCAGA TCTTCCGCAA GCCCGACCTG CTGCTGCAGT CGAAGGCGGT GTTCGGCCAG GCCTCCTATG CCATCACCGA CCAGTTCCGG CTCGAAGGCG GCGCGCGCTA TTCGTCGGAC AAGAAGCACA ATCTCAGCGC GACCAACATC GCGACCAACG TCAACACCTA TATCAACACC GGCGCGATCA ACTATGTGAA CAATCCGCCG AGCGCGGTCC GCCTTTCCTC GCACCGGACG ACCTTCCACG CCGCCGCCAA TTATCAGTGG ACGCCGCGCA ACCTGCTCTA CGCGAAGTTC GATACCGGCT ATAAGTCGGG CGGCTTCACC GACCTGCAGG TCTATGGTCC CGAGAACATC AAGGCCTGGG AAATCGGCTC GAAGAACCGT TTCCTCAACA ACACGCTCCA GGTGAACCTG TCGGCCTTCC TGTACAAGTA CAAGGACCAG CAGGTGCAGC AGCAGATCAC CCTGCCGAGC GGCGGCATCG GCACCGGCAC GGTCAACGCC GGCGCATCGA AGCTCTATGG CGGCGATGTC GACATCGTCT ACCAGGTCAC CCCCAACGAT CGCATCGAGC TGTTCGGCGC CTATCTGCAC GCCCGCTTCA CCGACTTCGT CGCGGTCGTC AACGGCGCCA ACAAGCAGCT CGCCGGCAAC CGGCTGCAGC AGGCGCCCGA CTGGGTGTTC AACGCCGGCT ATGAGCATGT CTTCCCGGTC GGCGACGGAT CGATCACGAC CCGTCTCCAG ACGCATTATG AGAGCAAGTC CTACTTCACC TTCACCAATT ACGGAGCCGA CAAGCAGCCC GGCTACATGC GGTCGGACAT CATCGTCACC TACGCCGCGC CGGACGATCG CTGGCGGCTC GAAGGCTACG TCCGCAACCT CGAGGACAAG CTGATCTTCA GCAATGCCGA CGTGGTCAGC ACCACCTATG TCAGCTACCG TTACCAATAT CAGGCGCCGC GGACCTATGG TGCGCGCCTG ACGGTCAACT TCTGA
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Protein sequence | MREISRARVI GMLLAGASLS AVPAHAQDAT SPAAEASQGG LADIVVTAEK RPSIAQRAPI ALSVVTSEAI KRQGVGNVAD LTTLTPSVGF SQNGANTVIT VRGVSSRDTN QLGDPAVSIS LDGFYFQRSL GLNIALFDLE RVEALRGPQG TLLGRNATGG ALNIITAKPT DSFSAALTGE VGNYDLIATQ GYVNIPVSDK VKLRAAFMTR DRDGYRHNAP ARDGDDDHSR AARLHLLFQP TDRWDILLTG EYSHQDGVGP VIQPVAHRFL PNGQLDTSRV DIPGDGKRFA VPSGGFIRLN SYNFRWNTNY DLDFATLTYL GGYRSLKYAN VRTLGADYAT NRRNFTFDQH ERPRSWNHEL RLSSKSDTPL IWQAGLYYFR EKNSTVSLFR DFRVPGQFPT PAACLCEPGV ELQIFRKPDL LLQSKAVFGQ ASYAITDQFR LEGGARYSSD KKHNLSATNI ATNVNTYINT GAINYVNNPP SAVRLSSHRT TFHAAANYQW TPRNLLYAKF DTGYKSGGFT DLQVYGPENI KAWEIGSKNR FLNNTLQVNL SAFLYKYKDQ QVQQQITLPS GGIGTGTVNA GASKLYGGDV DIVYQVTPND RIELFGAYLH ARFTDFVAVV NGANKQLAGN RLQQAPDWVF NAGYEHVFPV GDGSITTRLQ THYESKSYFT FTNYGADKQP GYMRSDIIVT YAAPDDRWRL EGYVRNLEDK LIFSNADVVS TTYVSYRYQY QAPRTYGARL TVNF
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