Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Swit_1899 |
Symbol | |
ID | 5198256 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Sphingomonas wittichii RW1 |
Kingdom | Bacteria |
Replicon accession | NC_009511 |
Strand | + |
Start bp | 2126787 |
End bp | 2127395 |
Gene Length | 609 bp |
Protein Length | 202 aa |
Translation table | 11 |
GC content | 71% |
IMG OID | 640581444 |
Product | hypothetical protein |
Protein accession | YP_001262397 |
Protein GI | 148554815 |
COG category | [R] General function prediction only |
COG ID | [COG1853] Conserved protein/domain typically associated with flavoprotein oxygenases, DIM6/NTAB family |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 32 |
Plasmid unclonability p-value | 0.843142 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 28 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGGGTGGC ATTTCTATCG CCCCGAGGAC GGCCATGGCC TTCCCCATGA CCCGTTCAAG GCGATCGTCA CGCCGCGCCC GATCGGGTGG ATATCGACGG TCGACGCCGA GGGACGGCCG AACCTGGCGC CCTACAGCTT CTTCAACGCG CTGTCGTCGC GGCCGCCGAT CCTCGGCTTC GCGAGCGAGG GGCGCAAGGA CACGCTCGCC AATATCGAGG CGACCGGCGA GTTCGTCTTC AACCTGGCGA CCGGACCGCT GGCGGCGGCG GTCAGCCTGA CCTCGCGGAC CGTCGCCGCC GACGTCGACG AGATGGCGCT GGCCGGGCTC GCCGCCGTGC CGTGCCGGAT CGTCCGCGCG CCGCGCGTCG CGGCCTCGCC AGCCGCGCTC GAATGCCGGC TGATCGAGGT CCATCGGATC ACCGACCTGT CCGGGCAGCC GACCGACCAC CGGCTCGTGA TCGGCCAGGT GGTCGGCGTC CATATCGCGC AGGACTATCT CCGCGACGGA CTGTTCGACA CGGCCGCAGC GGCGCCGCTC GCGCGCTGCG GCTATGTCGC CGACTATGCG GTCGCCGACC GCATCCTCAG CGTCCCGCGC GAGGATTGA
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Protein sequence | MGWHFYRPED GHGLPHDPFK AIVTPRPIGW ISTVDAEGRP NLAPYSFFNA LSSRPPILGF ASEGRKDTLA NIEATGEFVF NLATGPLAAA VSLTSRTVAA DVDEMALAGL AAVPCRIVRA PRVAASPAAL ECRLIEVHRI TDLSGQPTDH RLVIGQVVGV HIAQDYLRDG LFDTAAAAPL ARCGYVADYA VADRILSVPR ED
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