| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Swit_1892 |
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| Symbol | |
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| ID | 5199016 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Sphingomonas wittichii RW1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009511 |
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| Strand | + |
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| Start bp | 2119526 |
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| End bp | 2120440 |
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| Gene Length | 915 bp |
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| Protein Length | 304 aa |
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| Translation table | 11 |
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| GC content | 64% |
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| IMG OID | 640581437 |
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| Product | xylose isomerase domain-containing protein |
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| Protein accession | YP_001262390 |
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| Protein GI | 148554808 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG1082] Sugar phosphate isomerases/epimerases |
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| TIGRFAM ID | [TIGR01409] Tat (twin-arginine translocation) pathway signal sequence |
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Plasmid Coverage information |
| Num covering plasmid clones | 21 |
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| Plasmid unclonability p-value | 0.0241791 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 22 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAACCGTC GCGAATTGCT GCAGCTGTCG GCCGTCTCGC TCGCCGGACT CGCCGCCGCG
CCGGCCCTCG CCCGGGCAAG GAAGCCGCGC CGCTGGGGCG TCCAGGCGGG CACCATCCTC
AAGGCGCTCG AGGCCGATTT CGAAGGCACG CTGCGCGCGG TCGCGGCGAT GGGCTACAAG
GAGATCGGCA CCACCGGCAG CTTCGGCCGC GATCCGCATT ATGTGCGCGC GCAGTTCGAC
CGCTTCGGCC TGACCTCGCC CAACAACCAC GTCGCCCCCA AGGCGACCTA TGATTCGTTC
CAGAAATGGG TCCGGCGCGA GGTCTCGACC GAAGCCAACC GGGCCGTCTA CGCGAACAGC
TTCTCGTTCG ACCATGTCCA CGCGACCTTC GAGGACGGCA TCCGCACGTC GAAGATCCTC
GGCCAGAAAT ATGTGATGTG GGCGATCCTC CTCCCCAATC AGATCGCCGA CCGCCCGACC
ATCGACAAGC ATATCAAGCT GTTCAACGAA CTGGGCGACA TGTGCGCCAG GGAAGGCCTG
ACCTTCGCCT TCCACAACCA TGATCGCGAA TTCGCCAAGA TCGGCAACGA CGTGATCCTC
GACCTGTTCC TCGACAATAC CGATCCCGAC AAGGTCAAGT TCGAGCTGGA TTTCTACTGG
GCGACCAAGG CCGGCGCCGA TCCGCTCGCC TATCTCAAGC GCTATGCGGG CCGGACCAAG
CTCTGCCACA TCAAGGACAT CACCGCGACC GGCGACTTCG CCGCGGTCGG CAGCGGCACG
CTCGACGTCC CCGCGCTGAT CAAGGCGAGC GACGACGCCG GCATCGAGCA TTTCCTGGTC
GAGATCGACC GCTCGGACGA TCCGATGGGC GCGATCCGCA GCTCGATCCA ATATCTCCGC
AAGACCATCG GCTGA
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| Protein sequence | MNRRELLQLS AVSLAGLAAA PALARARKPR RWGVQAGTIL KALEADFEGT LRAVAAMGYK
EIGTTGSFGR DPHYVRAQFD RFGLTSPNNH VAPKATYDSF QKWVRREVST EANRAVYANS
FSFDHVHATF EDGIRTSKIL GQKYVMWAIL LPNQIADRPT IDKHIKLFNE LGDMCAREGL
TFAFHNHDRE FAKIGNDVIL DLFLDNTDPD KVKFELDFYW ATKAGADPLA YLKRYAGRTK
LCHIKDITAT GDFAAVGSGT LDVPALIKAS DDAGIEHFLV EIDRSDDPMG AIRSSIQYLR
KTIG
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