Gene Swit_1890 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSwit_1890 
Symbol 
ID5199511 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSphingomonas wittichii RW1 
KingdomBacteria 
Replicon accessionNC_009511 
Strand
Start bp2117611 
End bp2118540 
Gene Length930 bp 
Protein Length309 aa 
Translation table11 
GC content75% 
IMG OID640581435 
Product2-keto-3-deoxygluconate kinase 
Protein accessionYP_001262388 
Protein GI148554806 
COG category[G] Carbohydrate transport and metabolism 
COG ID[COG0524] Sugar kinases, ribokinase family 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones19 
Plasmid unclonability p-value0.0103461 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones21 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
TTGGTGACGA TCGCCGTCAT CGGCGAAGGA ATGGTCGAGC TTTCCCGGTC GGGGGAGCAT 
GGCGGGATCG CCGGCTGGGA GACCCACCAT GGCGGCGACG CGCTGAACAG CGCGATCCAC
CTGGCGCGCT TCGGGCTCGA AACCGGCTTC ATCTCCGCGC TCGGCGCCGA CCCGCTCAGC
CGCGCGCTGC GCCGGAGCTG GGCCGAGGAG GGGCTCGACC TCACCCACCT GCTGACCCAT
CCCGACCGCA ACGCCGGCCT CTACGCGATC GAGACCGACG CCGAGGGGGA ACGCAGCTTC
GCCTATTGGC GCAGCGACAG CGCCGCGCGC GCGATGCTCG ACCTGCCCGA GGCGGAGGCC
GCGCTGGCCC ATGCCGCGCG CTGCGACCTG CTCTATCTGA GCCTGATCAG CCTCGCCATC
CTGCCGCCGG CCGGACGCGA GCGGCTGGCC GGGCTGTGCC GCGACGTCCG CGCCCATGGC
GGCCGCGTCG CCTTCGACAG CAATTTCCGG CCGCGGCTCT GGTCCTCGCC CGCCGAGGCG
CGCGCAGCGG TCGAGGCGAT CGGCCCGCTG GTCGACATCG CGCTGCCGAC CCAGGTCGAC
GAGGCCGCGC TGTTCGGGCC CGAGCCGATC GACGCGGTCG CCGACCGCTG GGTCGGCTGG
GGCGTCGCCG AGGTCGCGGT CAAGAGCGGC GCGGACGGCT GCCTCGTCGC CACGCGCGAT
GGCCGGCACC GGATCGCCCC GCCCCGCGCG GTCGTCGCGG TCGACAGCAG CGGCGCGGGC
GATGCCTTCA ACGCCGGCTA TCTCGCGGCG CGCTTGGCCG GGCGGGCGCC CGCACAGGCG
GCGCCGGCCG GGCACGAACT GGCGGCGTGG ACGATCCTTC GCAGGGGAGC GATCCCGCCG
CGCGACCATG AGGCGCCCTA CCGCTTCTGA
 
Protein sequence
MVTIAVIGEG MVELSRSGEH GGIAGWETHH GGDALNSAIH LARFGLETGF ISALGADPLS 
RALRRSWAEE GLDLTHLLTH PDRNAGLYAI ETDAEGERSF AYWRSDSAAR AMLDLPEAEA
ALAHAARCDL LYLSLISLAI LPPAGRERLA GLCRDVRAHG GRVAFDSNFR PRLWSSPAEA
RAAVEAIGPL VDIALPTQVD EAALFGPEPI DAVADRWVGW GVAEVAVKSG ADGCLVATRD
GRHRIAPPRA VVAVDSSGAG DAFNAGYLAA RLAGRAPAQA APAGHELAAW TILRRGAIPP
RDHEAPYRF