Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Swit_1882 |
Symbol | |
ID | 5196440 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Sphingomonas wittichii RW1 |
Kingdom | Bacteria |
Replicon accession | NC_009511 |
Strand | + |
Start bp | 2108824 |
End bp | 2109288 |
Gene Length | 465 bp |
Protein Length | 154 aa |
Translation table | 11 |
GC content | 66% |
IMG OID | 640581427 |
Product | MarR family transcriptional regulator |
Protein accession | YP_001262380 |
Protein GI | 148554798 |
COG category | [K] Transcription |
COG ID | [COG1846] Transcriptional regulators |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 31 |
Plasmid unclonability p-value | 0.64976 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 20 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGACCAAGG ACCTGCGCCC CCTCGGCGAT CCCGGCTCGG AGGAGTTCCG GGTCGACGCC TATCCCTTCT ACCTGCTCAA CCGGGCGGTG AGCCGCTACA ATGTCGTGAT CGAGGCCGAG CTGCGCGCGA TCGGCATCGA CATCCCGACA TGGCGGGTAT TGATGGTGCT GGGCGAGAAA GCGCCCCGCC CGATCGCGCA GGTCGCGCGG TCGACGGTGA TCAACATCTC GACCATGGCG CGGATCGTCG AGCGGATGAC CCGCGCCGGG CTGATCGACA GCCGGCCGAG CAGCGAGGAC GGCCGGGTGA CCGAGATATT CCTGACCACG ACCGGACAGG AGAAGCTGGC CGCCGCCCGC GCGGTGACGG CGCCGATCTA TCGCAAGCTG ATCCGCGGTT TCGGCGCCGA GGATTTCGGC CTGCTGATCG ACATGCTCAA TCGCCTGCAC GACAATCTGG ATTGA
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Protein sequence | MTKDLRPLGD PGSEEFRVDA YPFYLLNRAV SRYNVVIEAE LRAIGIDIPT WRVLMVLGEK APRPIAQVAR STVINISTMA RIVERMTRAG LIDSRPSSED GRVTEIFLTT TGQEKLAAAR AVTAPIYRKL IRGFGAEDFG LLIDMLNRLH DNLD
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