Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Swit_1878 |
Symbol | |
ID | 5197948 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Sphingomonas wittichii RW1 |
Kingdom | Bacteria |
Replicon accession | NC_009511 |
Strand | + |
Start bp | 2102763 |
End bp | 2104334 |
Gene Length | 1572 bp |
Protein Length | 523 aa |
Translation table | 11 |
GC content | 73% |
IMG OID | 640581423 |
Product | FAD dependent oxidoreductase |
Protein accession | YP_001262376 |
Protein GI | 148554794 |
COG category | [Q] Secondary metabolites biosynthesis, transport and catabolism |
COG ID | [COG1233] Phytoene dehydrogenase and related proteins |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 22 |
Plasmid unclonability p-value | 0.215591 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 15 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAACGCCC AATGGGACGT CGTCGTCATC GGCAGCGGCA TCAATTCGCT GGTCTGCGCC GCCGAACTGG CGCTGAAGGG GCGCCGCGTG CTGGTGCTCG AACGCGACGA GGTCGCCGGC GGCTGCATGC GCACCGCCGA GGCGACCCTG CCCGGCTTCC GGCACGACCT GTTCGCGATG TCGCTGCCGC TGTTCGTCAC CGCCGCCCAT TATCCGCTGC TCGGCCCGAA GCTCGCCGAA CGGGGCCTGC GCCTGCTGAC CGCGCCGCAG CCGACCGCGG TGGTGCTCGA CGACGGGCGG ACGGCCGTGT TCGGCCCGTC GCGCGAGGCC AATGCAGCGA TGTTCGATTC GCTCCATCCG GGCGACGGCG CCGCCTATGT CCGCGCGATG CGGGAGATCG AGGCCAACGC CCCGCTGATC TTCGGCCTGC TCGGCCAGGA GCCCCGCAGC CGCGGGACGC TGGGCCTGCT CGCCCGCACC CTGCTGCGCG AGCGGATCGA CGGCCTTGCC GGGCTGACCG GCGATTTCCT GCGGCCGATG CGCGCCTGGC TCGAACAGGA TTTCGGATCG GACCTCGCCC GCGCGCTGAT CGCGCCGTGG ATTCTCCACA CCGGGCTCGG CCCCGACGCG CCGCTGTCGG CGCTGATGGG CAAGCTGATC CTGTTCACGC TCGAAGCGGT CGGCATCCCC TTCGTCGAGG GCGGCATCGC GCAGCTCGTC GCCGCCTTCA CCGCGCTGAT CGAGGCGCAG GGCGGGCAGG TCGAGACCGG CGCCGACGTC ACCCGCATCC TCGTCGAGCG CGGCGCGGCG ACCGGCGTCG AGACCGCCGA TGGCCGGCGC ATCGCGGCGC GCCGGGGCGT GGTCGCCAAC GTCACCCCGA CCCAGCTCTA CGGCCGGCTG CTGTCCGATC CCCCGCCCGC GCAGGCGGAG CGCGCGCGCC GCTACGTCTA TGGCCGCGCC GACATGCAGA TCCACCTCGC GCTGTCCGAG CCGCCGCGCT GGCGCGATCC GTCGCTCGAC GCGGTCGCGC TGATCCACGT CACGCCGGGG CTCGACGGCG TCTCGCGAGC GGTGAACGAG GCCGAGCGCG GCCTGCTGCC GGTCGAAGGG ACGATCGTCG TCGGCCAGCC GGCGGCGACC GACCCGTCGC GCGTCCCGCC GGGCCAGGGG CTGCTCTGGA TTCAGCTCCA GGAACTGCCG CGTCAGGTGC GGGGCGACGC CGCCGGACTG ATCGCGCCGC CCGCCGACGG CCGCTGGTCG CCCGCGCTGG CCGAAGCCTA TGCCGCGCGC ATCCTCGACC GGCTGCGCGG CTGCATCGCC AATCTCGACG GCGCGCTGCT GAAGACGGCG ATCCTGTCGC CGGCCGATCT CGAGGCGATG AACATCAACC TGGTCGGCGG CGATCCCTAT TCGGGCGCCT GCTCGATCGA CCAGTTCCAC CTGTTCCGCC CGCTCGCCGG CGGCCGCAAC CACGACACGC CGGTGCGCCG GCTGTTCCAT ATCGGCGCGT CGACCCATCC CGGGCCGGGG CTCGCCGGCA TGTCGGGCCA TATGGTGGCG GCGCGGCTTT AA
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Protein sequence | MNAQWDVVVI GSGINSLVCA AELALKGRRV LVLERDEVAG GCMRTAEATL PGFRHDLFAM SLPLFVTAAH YPLLGPKLAE RGLRLLTAPQ PTAVVLDDGR TAVFGPSREA NAAMFDSLHP GDGAAYVRAM REIEANAPLI FGLLGQEPRS RGTLGLLART LLRERIDGLA GLTGDFLRPM RAWLEQDFGS DLARALIAPW ILHTGLGPDA PLSALMGKLI LFTLEAVGIP FVEGGIAQLV AAFTALIEAQ GGQVETGADV TRILVERGAA TGVETADGRR IAARRGVVAN VTPTQLYGRL LSDPPPAQAE RARRYVYGRA DMQIHLALSE PPRWRDPSLD AVALIHVTPG LDGVSRAVNE AERGLLPVEG TIVVGQPAAT DPSRVPPGQG LLWIQLQELP RQVRGDAAGL IAPPADGRWS PALAEAYAAR ILDRLRGCIA NLDGALLKTA ILSPADLEAM NINLVGGDPY SGACSIDQFH LFRPLAGGRN HDTPVRRLFH IGASTHPGPG LAGMSGHMVA ARL
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