| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Swit_1877 |
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| Symbol | |
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| ID | 5197947 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Sphingomonas wittichii RW1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009511 |
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| Strand | + |
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| Start bp | 2101975 |
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| End bp | 2102766 |
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| Gene Length | 792 bp |
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| Protein Length | 263 aa |
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| Translation table | 11 |
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| GC content | 74% |
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| IMG OID | 640581422 |
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| Product | short chain dehydrogenase |
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| Protein accession | YP_001262375 |
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| Protein GI | 148554793 |
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| COG category | [I] Lipid transport and metabolism
[Q] Secondary metabolites biosynthesis, transport and catabolism
[R] General function prediction only |
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| COG ID | [COG1028] Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 32 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 15 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGATATCGC TCGACGGCAA GGTCGCGATC GTGACCGGCG CGACGCAGGG CCTCGGCGCC
GGCATCGCCG GCTCGCTCCA CGCGGCGGGC GCTTCGGTGC TCGTCACCGG CCGCGATGCC
GAGCGCGGGG CGGCGGTGGT TGCGGCGCTG GGCGAGCGGG CCGCCTTCGT CGCCGCAGAC
ATCGCCCAGG ACGAGGGCGT CACGACCTGC CTCGATGCCG CGCTGGCGCG GTTCGGGCGG
CTCGACATCC TCGTCAACAA CGCCTGTCTC TATGCCGATC CCGGCCTCGG CGCGAGCCGC
GAGGAATGGC ACCGCTCGCT CGACGTCAAT CTGGTCGGCC CGGCGCTGCT GATCGCCGGG
GCGGCCGGGC ATCTGCCATC GCCGGGCGGC GTGATCGTCA ACATCGGCAG CGTCGGCGGC
AAATTCGGCG CGGCCGGGCG GCTGCTCTAC CCGGCATCGA AGGCCGCGCT GATGCAGCTC
ACCAAGAGCG CGGCGGTGAC GCTCGCCCCG CGCGGCATCC GCGTGCTCAC CGTCTCGCCC
GCCTGGACCT GGTCCCCGGC GCTGGCCGGC ATGGCGGGCA GCGAGCAGCG CGCCGACGCG
GTGGGCGCGC GCACCCATCC GCTCGGCCGG GTGGGCCGCG ACGCCGATGT CGGCGACGTG
GTGGTCTTCG CCTGTTCGGA CATGGCCCGC TTCATGACCG GCGTCGACCT GCCCGTCGAC
GGCGGCTATT CGATCCTGGG CCCCGACCAG GGGCTGGGCC CGCGTCCATG GTTCGAGGGA
GGGGAACAAT GA
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| Protein sequence | MISLDGKVAI VTGATQGLGA GIAGSLHAAG ASVLVTGRDA ERGAAVVAAL GERAAFVAAD
IAQDEGVTTC LDAALARFGR LDILVNNACL YADPGLGASR EEWHRSLDVN LVGPALLIAG
AAGHLPSPGG VIVNIGSVGG KFGAAGRLLY PASKAALMQL TKSAAVTLAP RGIRVLTVSP
AWTWSPALAG MAGSEQRADA VGARTHPLGR VGRDADVGDV VVFACSDMAR FMTGVDLPVD
GGYSILGPDQ GLGPRPWFEG GEQ
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