Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Swit_1872 |
Symbol | |
ID | 5199523 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Sphingomonas wittichii RW1 |
Kingdom | Bacteria |
Replicon accession | NC_009511 |
Strand | - |
Start bp | 2097540 |
End bp | 2098499 |
Gene Length | 960 bp |
Protein Length | 319 aa |
Translation table | 11 |
GC content | 74% |
IMG OID | 640581417 |
Product | D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding |
Protein accession | YP_001262370 |
Protein GI | 148554788 |
COG category | [C] Energy production and conversion [H] Coenzyme transport and metabolism [R] General function prediction only |
COG ID | [COG1052] Lactate dehydrogenase and related dehydrogenases |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 40 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 16 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | GTGGCGCGGA TATTGCTGAC CCGGCGTTGG CCGGAGGCCG TCGAGGAGGA ACTGGCGGCG CGCCACGACC TGCACCGCAA CGAGAGCGAC CGGCCGATGA GCCGGCAGGA GCTGGCGGAG GCGATCCGCG CCTTCGACGT CGTCTGCCCC ACCGTCTCCG ACCGGATCGA CGCCGAGGTG ATCGGCCGGG GCGGCGGCGC GCGCATCCTC GCCAATTACG GCGCGGGGAT CGAGCATATC GACCTTGCGG CGGCGCGCGC GGCCGGGATC GCCGTCACCA ACACCCCCGA CGTGCTGACC GACGCCACCG CCGAACTGGC GGTGCTGCTG ATGCTGATGG TCGCCCGCCG CGCCGGCGAG GGCGAGCGCG AGCTGCGCTC CGGCGGCTGG ACGGGCTGGC GGCCGACCCA TCTGCTCGGC CGGTCGATGC AGGGCCGGAC GCTGGGCCTG ATCGGCTATG GCCGGATCGC GCAGGAGACC GCGCGGCGCG CGCAGGCGGC GCTCGGCGTG CGGCTGGCCT ATCACAGCCG CCGTCCGCTC GATCCGGCGT CCGATCCGCT CGACGCGCGC TATTGCGCCT CGGTCGCCGA TCTGGTGGCC GAGGCGGACA TCGTCTCGCT CCATTGCCCG GGCGGGGCCG AGACCCATCA TCTGATCGAC GCCGCGATGC TCGCGCGGAT GAAGCCCGAC GCGGTGCTGA TCAACACCGC GCGCGGCACC GTGGTCGACG AGGCGGCGCT CGCCGAGGCG CTGGCGCAGG GCCGGATCGG CGGCGCCGGG CTCGACGTCT ACCAGGGCGA GCCGGCGGTG AACCCGCTGC TGCTGGCGGC CCCCAATCTC GTGCTGCTGC CGCATCTCGG CAGCGCGACG ATCGAGACGC GCGAGGCGAT GGGGCGCCAG GCGGTGCTCA ACCTCGAAGC GCTGCTCGAC GGCCGCGAGC CGCCCAACCG TGTCGCCTGA
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Protein sequence | MARILLTRRW PEAVEEELAA RHDLHRNESD RPMSRQELAE AIRAFDVVCP TVSDRIDAEV IGRGGGARIL ANYGAGIEHI DLAAARAAGI AVTNTPDVLT DATAELAVLL MLMVARRAGE GERELRSGGW TGWRPTHLLG RSMQGRTLGL IGYGRIAQET ARRAQAALGV RLAYHSRRPL DPASDPLDAR YCASVADLVA EADIVSLHCP GGAETHHLID AAMLARMKPD AVLINTARGT VVDEAALAEA LAQGRIGGAG LDVYQGEPAV NPLLLAAPNL VLLPHLGSAT IETREAMGRQ AVLNLEALLD GREPPNRVA
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