Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Swit_1870 |
Symbol | |
ID | 5199276 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Sphingomonas wittichii RW1 |
Kingdom | Bacteria |
Replicon accession | NC_009511 |
Strand | - |
Start bp | 2096182 |
End bp | 2096760 |
Gene Length | 579 bp |
Protein Length | 192 aa |
Translation table | 11 |
GC content | 60% |
IMG OID | 640581415 |
Product | AsnC family transcriptional regulator |
Protein accession | YP_001262368 |
Protein GI | 148554786 |
COG category | [K] Transcription |
COG ID | [COG1522] Transcriptional regulators |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 29 |
Plasmid unclonability p-value | 0.377198 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 15 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | GTGATCGGAC GCCACTATCG ATCAGCTGTG GATGAATTTC TTTGCGGTGG TGCCCGTGTT CGCTATGACT GTGGCTATTC CGGCGAGAAA AAATTGCGCG AGGTGTCCAT GGCCGCTGCC GATCTCGATA GTTTCGATCG CAAGATCCTC CGCATCCTCC AGCGCGACAA CATGACGAGC CAGCGGGAGA TCGCCTATCA GGTCAATCTC TCGGCGGCGG CGGTCCATCG GCGCATCCAC CGGCTGCATG CCGACGGCAT CGTCACCGCC AACATGGCGG TGCTCTCGCC GTCGAAGATC GGCCGCCCCA TCTCGGTGAT CGTCGAACTC GAGGTCGAGA GCGAGCGGCC CGAGGAACTC GACCAGGTCA AGCGGTCGCT CGCCGCCGCG CCCGAGGTCC AGCAATGCTA TTATGTCACC GGGGAGGTCG ATTTCATCGT CATCGTCTCG GTCGCCGACA TGAGCGAATA TGAGGAGATC ACCAAGCGGC TGTTCTTCGC CAATCCCAAC ATCAAGAAGT TCCGAACCTA TGTGGCGATG GACCGGGTGA AGACCAGCTT CGAGATGCCC GTCGATTGA
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Protein sequence | MIGRHYRSAV DEFLCGGARV RYDCGYSGEK KLREVSMAAA DLDSFDRKIL RILQRDNMTS QREIAYQVNL SAAAVHRRIH RLHADGIVTA NMAVLSPSKI GRPISVIVEL EVESERPEEL DQVKRSLAAA PEVQQCYYVT GEVDFIVIVS VADMSEYEEI TKRLFFANPN IKKFRTYVAM DRVKTSFEMP VD
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