Gene Swit_1870 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSwit_1870 
Symbol 
ID5199276 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSphingomonas wittichii RW1 
KingdomBacteria 
Replicon accessionNC_009511 
Strand
Start bp2096182 
End bp2096760 
Gene Length579 bp 
Protein Length192 aa 
Translation table11 
GC content60% 
IMG OID640581415 
ProductAsnC family transcriptional regulator 
Protein accessionYP_001262368 
Protein GI148554786 
COG category[K] Transcription 
COG ID[COG1522] Transcriptional regulators 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones29 
Plasmid unclonability p-value0.377198 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones15 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGATCGGAC GCCACTATCG ATCAGCTGTG GATGAATTTC TTTGCGGTGG TGCCCGTGTT 
CGCTATGACT GTGGCTATTC CGGCGAGAAA AAATTGCGCG AGGTGTCCAT GGCCGCTGCC
GATCTCGATA GTTTCGATCG CAAGATCCTC CGCATCCTCC AGCGCGACAA CATGACGAGC
CAGCGGGAGA TCGCCTATCA GGTCAATCTC TCGGCGGCGG CGGTCCATCG GCGCATCCAC
CGGCTGCATG CCGACGGCAT CGTCACCGCC AACATGGCGG TGCTCTCGCC GTCGAAGATC
GGCCGCCCCA TCTCGGTGAT CGTCGAACTC GAGGTCGAGA GCGAGCGGCC CGAGGAACTC
GACCAGGTCA AGCGGTCGCT CGCCGCCGCG CCCGAGGTCC AGCAATGCTA TTATGTCACC
GGGGAGGTCG ATTTCATCGT CATCGTCTCG GTCGCCGACA TGAGCGAATA TGAGGAGATC
ACCAAGCGGC TGTTCTTCGC CAATCCCAAC ATCAAGAAGT TCCGAACCTA TGTGGCGATG
GACCGGGTGA AGACCAGCTT CGAGATGCCC GTCGATTGA
 
Protein sequence
MIGRHYRSAV DEFLCGGARV RYDCGYSGEK KLREVSMAAA DLDSFDRKIL RILQRDNMTS 
QREIAYQVNL SAAAVHRRIH RLHADGIVTA NMAVLSPSKI GRPISVIVEL EVESERPEEL
DQVKRSLAAA PEVQQCYYVT GEVDFIVIVS VADMSEYEEI TKRLFFANPN IKKFRTYVAM
DRVKTSFEMP VD