| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Swit_1865 |
|---|
| Symbol | |
|---|
| ID | 5200008 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Sphingomonas wittichii RW1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009511 |
|---|
| Strand | - |
|---|
| Start bp | 2088710 |
|---|
| End bp | 2089237 |
|---|
| Gene Length | 528 bp |
|---|
| Protein Length | 175 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 72% |
|---|
| IMG OID | 640581410 |
|---|
| Product | GCN5-related N-acetyltransferase |
|---|
| Protein accession | YP_001262363 |
|---|
| Protein GI | 148554781 |
|---|
| COG category | [J] Translation, ribosomal structure and biogenesis |
|---|
| COG ID | [COG1670] Acetyltransferases, including N-acetylases of ribosomal proteins |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 30 |
|---|
| Plasmid unclonability p-value | 0.360352 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 14 |
|---|
| Fosmid unclonability p-value | 0.789976 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGACCGGGC TGCGCCTGCT TCCCTTCGTG CCGGAGGATT TCGATGCGCT GGCGGGCTGG
TTCGCGAGCC CGGCGGAAGC CGTGCTGTGG GGCGGCCCGC AGGTCGCCTG GCCGCTCACC
GCCGCCCAGT TCGCGGCGAT GCTCGCGGAA GGCGACGCCG TGCCGCCGCA GCGGCGATGC
TGGTCGGCCT GGCAGGGGGG CGCGATGGTC GGTCATGGCC AGGCTGTCTA TGACCGGGCC
GGGGGCAGCG CCCGGCTGGC GCGGATCGCG ATCGCGCCCG CGCGGCGCGG CGAGGGGCTG
GGCGGCCCGA TGCTCGACGC GCTGCTGCGC GAGCTCTTCG CCGATCCGGC GATCGGGCGG
GTCGACCTCA ACGTCTATAC CCATAACCGG CGCGCGATCG CGCTCTACAG GCGGCTCGGC
TTCGTGCCCG GCGCGCTCAC GCCCGGTGCC GTGCGGATCG ACGGGCAGAT ATGGGACGGC
ATGGTGATGG CGATCACGCG CGAGGACTAT GTCGCGAAAT TAATTTGA
|
|---|
| Protein sequence | MTGLRLLPFV PEDFDALAGW FASPAEAVLW GGPQVAWPLT AAQFAAMLAE GDAVPPQRRC
WSAWQGGAMV GHGQAVYDRA GGSARLARIA IAPARRGEGL GGPMLDALLR ELFADPAIGR
VDLNVYTHNR RAIALYRRLG FVPGALTPGA VRIDGQIWDG MVMAITREDY VAKLI
|
|---|
| |