| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Swit_1864 |
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| Symbol | |
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| ID | 5200007 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Sphingomonas wittichii RW1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009511 |
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| Strand | - |
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| Start bp | 2087433 |
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| End bp | 2088632 |
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| Gene Length | 1200 bp |
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| Protein Length | 399 aa |
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| Translation table | 11 |
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| GC content | 72% |
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| IMG OID | 640581409 |
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| Product | diaminopropionate ammonia-lyase |
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| Protein accession | YP_001262362 |
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| Protein GI | 148554780 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG1171] Threonine dehydratase |
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| TIGRFAM ID | [TIGR01747] diaminopropionate ammonia-lyase family |
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Plasmid Coverage information |
| Num covering plasmid clones | 21 |
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| Plasmid unclonability p-value | 0.0500959 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 12 |
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| Fosmid unclonability p-value | 0.41026 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGATATTGC TGAATGAACT TCCAGAGAAA AATCGATCTA TTTCGGAAAT GGATCGGCTC
ATGCTGGGCC GGGAGGCGCC CGGACAGGTG TTGTCCTATC TGCGCCTGTG CCCCGATTAT
GCGCCGACGC CCTTGTTCCG GCTGCCTGCG CTCGCTGCGG CGCTCGGCAT CGGCGGGCTG
CGGATCAAGG ACGAGGGCGC GCGGCTGGGG CTAGGCAGCT TCAAGGCGCT GGGCGGCGCC
TATGCCGTGA TCCGGATCAT CGCCGAGATG GCCGAACGGG CGCTGGGCCG GCCGATCGAC
CCGGCGATGC TGACGGCGCC CGAGGTCCGC GCGATCGCGG CGGGCGTCAC GGTCGGCTGC
GCGACCGACG GCAACCATGG CCGCTCGGTT GCGGCGGGGG CGCGGCTGAT GGGCGCGCGG
GCGGTCATCT TCCTCCACCG CGGCGTGTCG GCCGAGCGCG AGGCGGCGAT CGCCGCGCTC
GGCGCGACGA CGGTGCGCGT CGAGGGCAAT TACGACGATT CGGTCGCCCA TGCGCTGCGC
GTCTGTTCGG AGCGCGGCTG GCCGGTGGTG TCCGACACCT CCTGGCCCGG TTATGAGGCG
ACCCCGCTGC GGGTGATGCA GGGCTATACC GCGATGTTGC GCGAGGTGCT CGACGCCGCT
CCCGTGCCGC CCAGCCATGT CTTCATCCAG GCCGGCGTCG GTGGGGTCGC GGCGGCGATC
GCGGCGCATC TGTCCGAGGT GTGCGGCGAC GCCATGCCCC GGATCGTCGT GGTCGAGCCC
GAGCGGGCGG CCTGCCTGCT CGAAAGCGCG CGGCGCGGAA AGGTCGGGCC GATCCCCCAT
GGCGAACCCA CGCTGATGGC GATGCTCGAA TGCTACGAGC CGTCGCCGGT CGCCTGGCGC
ATCCTCGCCC GGACCGCCCA TGCCTTCATG ACCGTCGGGG AGGAGGATGC GGCGGCCGCG
ATGCGGCGCC TCGCGCGTCC GATCGACGGC GACCCGGCGA TCGTCGCGGG CGAGAGCGGC
GGCGTCGGCC TCGCCGCGCT GCTCAGCGTG GCGGACGACG CGGAGGCCCG CCGCCTGCTC
GACCTCGGCC CCGATGCGGA GGTGCTGCTG TTCAACACCG AAGGCGCCAC CGATCCGGGC
ATCTACCGGT CGATCACCGG GATCGAGCCG GACGCGCTGC TCGCGGCGGC CCGGTCGTGA
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| Protein sequence | MILLNELPEK NRSISEMDRL MLGREAPGQV LSYLRLCPDY APTPLFRLPA LAAALGIGGL
RIKDEGARLG LGSFKALGGA YAVIRIIAEM AERALGRPID PAMLTAPEVR AIAAGVTVGC
ATDGNHGRSV AAGARLMGAR AVIFLHRGVS AEREAAIAAL GATTVRVEGN YDDSVAHALR
VCSERGWPVV SDTSWPGYEA TPLRVMQGYT AMLREVLDAA PVPPSHVFIQ AGVGGVAAAI
AAHLSEVCGD AMPRIVVVEP ERAACLLESA RRGKVGPIPH GEPTLMAMLE CYEPSPVAWR
ILARTAHAFM TVGEEDAAAA MRRLARPIDG DPAIVAGESG GVGLAALLSV ADDAEARRLL
DLGPDAEVLL FNTEGATDPG IYRSITGIEP DALLAAARS
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