| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Swit_1859 |
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| Symbol | |
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| ID | 5199038 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Sphingomonas wittichii RW1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009511 |
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| Strand | - |
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| Start bp | 2080603 |
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| End bp | 2082933 |
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| Gene Length | 2331 bp |
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| Protein Length | 776 aa |
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| Translation table | 11 |
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| GC content | 65% |
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| IMG OID | 640581404 |
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| Product | TonB-dependent receptor, plug |
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| Protein accession | YP_001262357 |
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| Protein GI | 148554775 |
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| COG category | [P] Inorganic ion transport and metabolism |
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| COG ID | [COG1629] Outer membrane receptor proteins, mostly Fe transport |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 27 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 14 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAAGATCG TCAAGAGGAA GCACGCGCTG TTGCAGTCGG TGGCGATTCT TGTGGCCGTG
GGCGTTCCTT CGGTGGCGTC TGCCCAGGTC GAGGAGATCG TGGTGACGGC GCAGAAGCGC
GAGCAGTCGA TCCGCGACGT TCCGATCTCG CTGGCCGTCA TCTCGGGCGA CGATCTGAAG
AAGCGGCAGG TCTCCGGCAT CCAGGACCTC GCCAATTCCG TGCCCAACGT GTTCGTCTCC
AAGGGAACCG TGTCGGACAA CATCTATATC CGCGGCGTCG GTTCGGGGTC GAACGCGGGC
TTCGAGCAGG CGGTCGCGAC CTTCGTCGAC GGCATCTATC ACGGGCGCTC GCGCTATACC
CAGTCGGCGC TCGTCGATCT GGAGCGGGTC GAGGTGCTGC GCGGGCCGCA GACGATCTAT
TTCGGCAACA ACGCGATCGG CGGCGCATTC AGCGTGACCA CCAAGAAGCC CAGCCTGAAG
GACTGGGGCG GCTATGCGCT CGCCTCCTAC GAGTTCGAGG GCAATGAGCC GGCGGTCGAG
GCCGCCGTCG GCGGACCGAT CGTCGAGGAC AAGCTCGCGG TCAGGATCGC CGGCCGCTAC
TCGCATCTCG GCGGCTACAT CAAGAACGAC TCCACCGGGA AGGACAATCC CAAGATCAAG
GACCGCTTCA TCCGCGGGTC CGCGCTGTGG CAGATGGCGC CGGGTTGGAC GACCCTGGTC
AAGGCGGAAT ATGGCAAGCA GGATTCGATC GCGCCGTTCG CCGCCCAGCT CACCGATTGC
CCGCCGGCGG CGCCGTTCTC CACCGCCGCG ACCTTCTCCT GCGCCTATGC GCTGGCGACC
AACCAGGAGT CCAAGTTCGA CTATCATCGC CAGTCGGAGC CGGGCGAGTT CGGAAACATC
AAGGCTTCCG AATATATGGT GAAGATCGAG CGGGAGAATA TCGATGGTCC GGGCCTGGTG
GCCCAGGCCT CCTATTCGAA GATGGACTTT CAGATCGTCG CCGATACCGA CGGGGTGCCC
GCCAGCTTCT TCAACTACAA CAGCAGCGAA TATCTGAAGC AGTCGACGGT CGAACTGCGG
ATCGTGTCTC CGGCCCAGTC GAAGATCGAA TATGTCGCCG GTGTATATTA TCTCCACTCG
AAGGCGGGGA TCGGCACGAC GCTCAATTTC CCGTTCGCGA ACGTGCTGCT GGCCGGGCCG
CTGGCGCCGC TCGCCCCCTT CGCGCCGCTC GCCGGCGACA TCGACCTTCG CGAGAAGGAG
AACGCCTTCT CGGCCTTCGG CTCGGTGACC TACCCGCTGA CCGATAAATT CTCGATCACG
GGCGCGCTGC GCTACACCCA TTCGAAGAAG ACGGGCACCC AGTCGGCCAC CAACGCGCAG
GCGCTCGACA CCTATGGGCT GTCGGTGGTG CCGCTGCCGG CGGGCCTCCA GCCGGTCGCC
GCCTTCCTGA CCGGCTTCGT CGATCATACG ACGCAGGCGC GGGTTTCGGA TGGGGTGTTC
CTGCCGTCGG TCTCGGCGCA GTACAAGGCG AACCGGGACG TCTCCTTCTA CGCGAAATAC
AGCAAGGGCT TCAAGGCGGG CGGTTTCGAC GCGGTCGAGC TGACGGGAAT CCCCGACCGG
CTCAGCTATG CGCCGGAGAA GGTGAACGCG TTCGAGGCCG GCCTCAAGTC GGTGCTGTTC
GATCGCTCGG TTTCGTTCAA CCTCTCGGTC TTCCGCAGCA TGTACAAGGA CCTGCAGCAG
AGCGTCACCC AGTTCACCGC GACCTCGGCC TTCATCACCG TGACCAATGT CGGCGGCCTC
AGGACGCAGG GCGTCGAGGC TGAACTGGTG TGGCGGCCCA ACGACCGCTT CGAGTTCGGC
AGCGACTTCG CGCTGCTCGA CGCCAGCTAT CGCAATTACG CGAACGCCGG CTGCACCGCC
CTGCAGGCGC TCCAGGCCAA GGCGGCCGGC AAGATCGGCT GTTCGCAGGA CCTCAGCGGC
CGCTCGCCGC CCTTCGCGCC GAAATATACC GGCAACGTCC GCGCCGCGTT CAACCAGCCG
CTCAACGACG CCCTGAAGTT CAGCGCGAAC GCCATGCTGT CCTTCGCCGG CTCCTATGAC
GTGTCGCCCG ACAAGGACCC GGTCACCCGG CAGAAGTCCT GGCGGAAGAT CGACCTGCGG
CTGGGGATCG GCGATATCGA CGACAAGTGG ACGCTGGCGT TCGTCGGCAC CAACCTGGCC
AATGTGAAGG TCAGCGGATC GGCGACCGGC GTGGTGGCGT CGGCGGGGTC CTTCACGAGG
ACCATCCTGC GGGGACGGAC GCTTGCCGCG CAGGCCCAGG TCAAGTTCTG A
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| Protein sequence | MKIVKRKHAL LQSVAILVAV GVPSVASAQV EEIVVTAQKR EQSIRDVPIS LAVISGDDLK
KRQVSGIQDL ANSVPNVFVS KGTVSDNIYI RGVGSGSNAG FEQAVATFVD GIYHGRSRYT
QSALVDLERV EVLRGPQTIY FGNNAIGGAF SVTTKKPSLK DWGGYALASY EFEGNEPAVE
AAVGGPIVED KLAVRIAGRY SHLGGYIKND STGKDNPKIK DRFIRGSALW QMAPGWTTLV
KAEYGKQDSI APFAAQLTDC PPAAPFSTAA TFSCAYALAT NQESKFDYHR QSEPGEFGNI
KASEYMVKIE RENIDGPGLV AQASYSKMDF QIVADTDGVP ASFFNYNSSE YLKQSTVELR
IVSPAQSKIE YVAGVYYLHS KAGIGTTLNF PFANVLLAGP LAPLAPFAPL AGDIDLREKE
NAFSAFGSVT YPLTDKFSIT GALRYTHSKK TGTQSATNAQ ALDTYGLSVV PLPAGLQPVA
AFLTGFVDHT TQARVSDGVF LPSVSAQYKA NRDVSFYAKY SKGFKAGGFD AVELTGIPDR
LSYAPEKVNA FEAGLKSVLF DRSVSFNLSV FRSMYKDLQQ SVTQFTATSA FITVTNVGGL
RTQGVEAELV WRPNDRFEFG SDFALLDASY RNYANAGCTA LQALQAKAAG KIGCSQDLSG
RSPPFAPKYT GNVRAAFNQP LNDALKFSAN AMLSFAGSYD VSPDKDPVTR QKSWRKIDLR
LGIGDIDDKW TLAFVGTNLA NVKVSGSATG VVASAGSFTR TILRGRTLAA QAQVKF
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