| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Swit_1857 |
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| Symbol | |
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| ID | 5199036 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Sphingomonas wittichii RW1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009511 |
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| Strand | + |
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| Start bp | 2077422 |
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| End bp | 2077790 |
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| Gene Length | 369 bp |
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| Protein Length | 122 aa |
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| Translation table | 11 |
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| GC content | 71% |
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| IMG OID | 640581402 |
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| Product | thioesterase superfamily protein |
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| Protein accession | YP_001262355 |
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| Protein GI | 148554773 |
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| COG category | [Q] Secondary metabolites biosynthesis, transport and catabolism |
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| COG ID | [COG2050] Uncharacterized protein, possibly involved in aromatic compounds catabolism |
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| TIGRFAM ID | [TIGR00369] uncharacterized domain 1 |
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Plasmid Coverage information |
| Num covering plasmid clones | 24 |
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| Plasmid unclonability p-value | 0.0499053 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 18 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGGCGACCG GCTTCAACGC GCTGATCGGC CTGCGGCACA TCGGGCTGGA CGACGGCCGC
TACTGGATCG AGATCGATGC CGGCGACGCG CATGTCCACG AACGGGGGTT CGTGCATGGC
GGCGTCATCC TGAGCCTGCT CGACATCGCC ATGGCGCGCG TCGTCCGCCA TGGCGAGGGC
GGCGAACGCT ACATGCCGAC GATCGAGTTC AACGCCAGCT TCCTGCGCCC GATCGAGCCC
GGACGCCTCC GCGCCTGCGG GACGATCCTG AAGCGGTCGC GAACGCTGTG TCGCGCCGAG
GCGACCCTGT TCGACGCGCA GGGGCGCCCC GGCGCCAGCG GCCGCGCGGC GTTCGTCTCC
CAGCCATAG
|
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| Protein sequence | MATGFNALIG LRHIGLDDGR YWIEIDAGDA HVHERGFVHG GVILSLLDIA MARVVRHGEG
GERYMPTIEF NASFLRPIEP GRLRACGTIL KRSRTLCRAE ATLFDAQGRP GASGRAAFVS
QP
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