| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Swit_1839 |
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| Symbol | |
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| ID | 5197020 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Sphingomonas wittichii RW1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009511 |
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| Strand | + |
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| Start bp | 2059851 |
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| End bp | 2061545 |
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| Gene Length | 1695 bp |
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| Protein Length | 564 aa |
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| Translation table | 11 |
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| GC content | 70% |
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| IMG OID | 640581384 |
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| Product | 3-oxosteroid 1-dehydrogenase |
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| Protein accession | YP_001262337 |
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| Protein GI | 148554755 |
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| COG category | [C] Energy production and conversion |
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| COG ID | [COG1053] Succinate dehydrogenase/fumarate reductase, flavoprotein subunit |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 20 |
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| Plasmid unclonability p-value | 0.121411 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 18 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAACCAGG ATTTCGACGT CGTCGTCTGC GGCGCCGGCG CGGGCGGGAT GCTCGCGGCG
GTACGCCTCC ACGATCTGGG CCTGCGCGCC CTGGTGATCG AGAAATCGTC GCGATACGGC
GGGACGTCGG CCACCTCGGG CGGCGGCATC TGGATCCCCG ACCACGGCAT CGGCGTCGAG
CCGGACAGCC GCGAGCAGGC GCTCACCTAT CTCCGCGCCG TGTGCAAGGG CGATTATCGC
GACGACAAGC TCGCCGCCTA TGTCGACCAT GGCGGGGCAA TGATCGGCTA TCTGGCGTCG
ATCGGCGTGC CGATGGTCTC GATCCCCGGC TTTCCCGACT ATATCGCGCG GGCGCCGGGC
GCCTCGACCG GGCGGTCGCT CTTCCCGCCA GAGCTCGACG GCGCCGCGCT GGGGGAGGAA
TTCCACCGGC TGCGGGATTC GCCCAATGGA TACAAGCTGT TCGGGCGCTA TGCGCTCGAC
CTCCAGCAGT CCTTCACCCT GTCGGAGCGC GCGTTCGGAT GGCAATGGAC CGCCGCGCGC
ATGCTCCTCA AATACTGGCT CGACCTGCGC TGGCGCCGGA AGACGCCGCG CGACCGCCGG
CTGACGATGG GCCGGGCACT GGTCGGCGGG CTGCGCAAGG CGATGCTGGA GCGGAACATC
CCGCTGCTGC TCGACTGCGG CCTGGCCGGG CTTCGCGTCG AGGACGGCCG GGTGACCGGC
GTCGATGCGG TATCGGGCGG CGCGGCGCGG CGCTTCACGG CGCGGGCCGG CATCATCCTC
GCCGCCGGCG GGTTCGAGCA GAACCAGAAG CTCCGCGACG AACTGCTGCC GGTGGCGACG
AACCGCAACT GGAGCCTCAC CCCCAGCGGC CTCAACGTCG GGGACCCGCT GATCAGCGGC
ATCGCGGCGG GCGCGGCCAC CGAATCGCTC GACGCCAACT GGTGGGCGCC GAGCATGCAG
CTCCCGTCGC GGACCGAGCC GAACATCGAC CTCGCCGTGC CGATGTTCTT CGACCACCGG
CATCCGCACA GCCTGTGCGT GAACCGGCTC GGGCAGCGCT TCGTCAACGA AAGCTGCTCC
TATGACGAGT TCGGCCAGGC GATGATCGCC GATCACCGGC GGACCGGCGC GAACATCCCC
TGCTGGATGA TATTCGACGC CAGCTTCCGC CGCGCCTATC CGTGCGGCCC GATCCTGCCC
GATTTCGTCA TGCCCGATCG CCGCATCCCG CACGAATGGT GGGACAGCCA TGTCTTCCGG
GCCGGCAGCC TCGGCGCGCT CGCCGCGAAG ATGGACGTGC CCGCCGCGAC GCTGATCGCG
TCGGTGCGCC GGATGAACGG CTTCGCGCGG GCGGGCAAGG ACGAGGAATT CGGGCGGGGC
GAGAACCGCT TCGACCTGTT CTTCGGGAAG AAGGACGTCG GCCCCAATCC CTGCATGGCG
CCGGTCGAGA CGCCGCCCTT CTATGCGGTG CGGATCGACC TCGGCGACCT GGGCAGCAAG
GGCGGGCTGA AGACCGATGC CCGCGCTCGC GTCCTCGCCA CGACCGGCGC GCCGATCCCC
GGCCTGCATG CGATCGGGAA TTGCGCCGGC TCACCCTTCG GCAACTGCTA TCCGGGCGCG
GGCGGGACGC TGGGCCCCGC CACCGTGTTC GCCTATATCG CCGCCAACGA CCTCGCCGCG
CAGGCTCGCC CCTAG
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| Protein sequence | MNQDFDVVVC GAGAGGMLAA VRLHDLGLRA LVIEKSSRYG GTSATSGGGI WIPDHGIGVE
PDSREQALTY LRAVCKGDYR DDKLAAYVDH GGAMIGYLAS IGVPMVSIPG FPDYIARAPG
ASTGRSLFPP ELDGAALGEE FHRLRDSPNG YKLFGRYALD LQQSFTLSER AFGWQWTAAR
MLLKYWLDLR WRRKTPRDRR LTMGRALVGG LRKAMLERNI PLLLDCGLAG LRVEDGRVTG
VDAVSGGAAR RFTARAGIIL AAGGFEQNQK LRDELLPVAT NRNWSLTPSG LNVGDPLISG
IAAGAATESL DANWWAPSMQ LPSRTEPNID LAVPMFFDHR HPHSLCVNRL GQRFVNESCS
YDEFGQAMIA DHRRTGANIP CWMIFDASFR RAYPCGPILP DFVMPDRRIP HEWWDSHVFR
AGSLGALAAK MDVPAATLIA SVRRMNGFAR AGKDEEFGRG ENRFDLFFGK KDVGPNPCMA
PVETPPFYAV RIDLGDLGSK GGLKTDARAR VLATTGAPIP GLHAIGNCAG SPFGNCYPGA
GGTLGPATVF AYIAANDLAA QARP
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